CellProperties.hpp

/*

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*/


#ifndef _CELLPROPERTIES_HPP_
#define _CELLPROPERTIES_HPP_

#include <vector>

class CellProperties
{
private:
    std::vector<double>& mrVoltage;
    std::vector<double>& mrTime;

    bool mUnfinishedActionPotentials;

    double mThreshold;

    std::vector<double> mOnsets;
    std::vector<double> mRestingValues;
    std::vector<double> mCycleLengths;
    std::vector<double> mPeakValues;
    std::vector<double> mMaxUpstrokeVelocities;
    std::vector<double> mTimesAtMaxUpstrokeVelocity;
    std::vector<unsigned> mCounterOfPlateauDepolarisations;

    void CalculateProperties();

    std::vector<double> CalculateActionPotentialDurations(const double percentage);

    void CheckExceededThreshold(void);

    void CheckReturnedToThreshold(void);

public:

    CellProperties(std::vector<double> &rVoltage, std::vector<double> &rTime,  double threshold=-30.0)
        : mrVoltage(rVoltage),
          mrTime(rTime),
          mUnfinishedActionPotentials(false),
          mThreshold(threshold)
    {
        CalculateProperties();
    }

    std::vector<double> GetMaxUpstrokeVelocities();

    double GetLastMaxUpstrokeVelocity();

    double GetLastCompleteMaxUpstrokeVelocity();

    std::vector<double> GetTimesAtMaxUpstrokeVelocity();

    double GetTimeAtLastMaxUpstrokeVelocity();

    double GetTimeAtLastCompleteMaxUpstrokeVelocity();

    std::vector<double> GetCycleLengths();

    std::vector<double> GetPeakPotentials();

    double GetLastPeakPotential();

    double GetLastCompletePeakPotential();

    std::vector<double> GetRestingPotentials();

    std::vector<double> GetAllActionPotentialDurations(const double percentage);

    double GetLastActionPotentialDuration(const double percentage);

    std::vector<double> GetActionPotentialAmplitudes();

    std::vector<unsigned> GetNumberOfAboveThresholdDepolarisationsForAllAps();

    unsigned GetNumberOfAboveThresholdDepolarisationsForLastAp();
};

#endif //_CELLPROPERTIES_HPP_