Chaste Release::3.1
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00001 /* 00002 00003 Copyright (c) 2005-2012, University of Oxford. 00004 All rights reserved. 00005 00006 University of Oxford means the Chancellor, Masters and Scholars of the 00007 University of Oxford, having an administrative office at Wellington 00008 Square, Oxford OX1 2JD, UK. 00009 00010 This file is part of Chaste. 00011 00012 Redistribution and use in source and binary forms, with or without 00013 modification, are permitted provided that the following conditions are met: 00014 * Redistributions of source code must retain the above copyright notice, 00015 this list of conditions and the following disclaimer. 00016 * Redistributions in binary form must reproduce the above copyright notice, 00017 this list of conditions and the following disclaimer in the documentation 00018 and/or other materials provided with the distribution. 00019 * Neither the name of the University of Oxford nor the names of its 00020 contributors may be used to endorse or promote products derived from this 00021 software without specific prior written permission. 00022 00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00033 00034 */ 00035 00036 00037 #ifndef _CHASTEPOINT_HPP_ 00038 #define _CHASTEPOINT_HPP_ 00039 00040 #include "ChasteSerialization.hpp" 00041 #include "UblasVectorInclude.hpp" 00042 #include <vector> 00043 00044 00048 template<unsigned DIM> 00049 class ChastePoint 00050 { 00052 friend class boost::serialization::access; 00059 template<class Archive> 00060 void serialize(Archive & archive, const unsigned int version) 00061 { 00062 //archive & mLocation; //earlier versions of boost are unable to do this. See #1709 00063 } 00064 00065 private: 00066 00068 c_vector<double, DIM> mLocation; 00069 00070 public: 00071 00086 ChastePoint(double v1=0, double v2=0, double v3=0); 00087 00095 ChastePoint(std::vector<double> coords); 00096 00102 ChastePoint(c_vector<double, DIM> location); 00103 00107 c_vector<double, DIM>& rGetLocation(); 00108 00114 double operator[] (unsigned i) const; 00115 00121 double GetWithDefault(unsigned i, double def=0.0) const; 00122 00129 void SetCoordinate(unsigned i, double value); 00130 00137 bool IsSamePoint(const ChastePoint<DIM>& rPoint) const; 00138 }; 00139 00140 00141 #include "SerializationExportWrapper.hpp" 00142 // Declare identifier for the serializer 00143 EXPORT_TEMPLATE_CLASS_SAME_DIMS(ChastePoint) 00144 00145 namespace boost 00146 { 00147 namespace serialization 00148 { 00149 00150 template<class Archive, unsigned SPACE_DIM> 00151 inline void save_construct_data( 00152 Archive & ar, const ChastePoint<SPACE_DIM> * t, const BOOST_PFTO unsigned int file_version) 00153 { 00154 for (unsigned i = 0; i < SPACE_DIM; i ++) 00155 { 00156 //we archive coordinates of mLocation one by one 00157 //this is because earlier version of boost (<1.40, I think) cannot archive c_vectors 00158 double coord = t->GetWithDefault(i); 00159 ar & coord; 00160 } 00161 } 00162 00167 template<class Archive,unsigned SPACE_DIM> 00168 inline void load_construct_data( 00169 Archive & ar, ChastePoint<SPACE_DIM> * t, const unsigned int file_version) 00170 { 00171 std::vector<double> coords; 00172 coords.resize(SPACE_DIM); 00173 for (unsigned i=0; i<SPACE_DIM; i++) 00174 { 00175 double coordinate; 00176 ar & coordinate;//resume coordinates one by one 00177 coords[i] = coordinate; 00178 } 00179 //use constructor with standard vectors to re-build the object 00180 ::new(t)ChastePoint<SPACE_DIM>(coords); 00181 } 00182 } 00183 } // namespace ... 00184 00185 00191 template<> 00192 class ChastePoint<0> 00193 { 00194 public: 00203 ChastePoint(double v1=0, double v2=0, double v3=0); 00204 00211 double operator[] (unsigned i) const; 00212 }; 00213 00214 #endif //_CHASTEPOINT_HPP_