Chaste Release::3.1
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00001 /* 00002 00003 Copyright (c) 2005-2012, University of Oxford. 00004 All rights reserved. 00005 00006 University of Oxford means the Chancellor, Masters and Scholars of the 00007 University of Oxford, having an administrative office at Wellington 00008 Square, Oxford OX1 2JD, UK. 00009 00010 This file is part of Chaste. 00011 00012 Redistribution and use in source and binary forms, with or without 00013 modification, are permitted provided that the following conditions are met: 00014 * Redistributions of source code must retain the above copyright notice, 00015 this list of conditions and the following disclaimer. 00016 * Redistributions in binary form must reproduce the above copyright notice, 00017 this list of conditions and the following disclaimer in the documentation 00018 and/or other materials provided with the distribution. 00019 * Neither the name of the University of Oxford nor the names of its 00020 contributors may be used to endorse or promote products derived from this 00021 software without specific prior written permission. 00022 00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00033 00034 */ 00035 00036 #ifndef CRYPTSTATISTICS_HPP_ 00037 #define CRYPTSTATISTICS_HPP_ 00038 00039 #include "AbstractCryptStatistics.hpp" 00040 00044 class CryptStatistics : public AbstractCryptStatistics 00045 { 00046 private: 00047 00061 bool CellIsInSection(double xBottom, double xTop, double yTop, const c_vector<double,2>& rCellPosition, double widthOfSection=0.5); 00062 00077 bool CellIsInSectionPeriodic(double xBottom, double xTop, double yTop, const c_vector<double,2>& rCellPosition, double widthOfSection=1.0); 00078 00079 public: 00080 00086 CryptStatistics(MeshBasedCellPopulation<2>& rCrypt); 00087 00107 std::vector<CellPtr> GetCryptSection(double yTop, 00108 double xBottom = DBL_MAX, //RandomNumberGenerator::Instance()->ranf()*crypt_width, 00109 double xTop = DBL_MAX, //RandomNumberGenerator::Instance()->ranf()*crypt_width, 00110 bool periodic = false); 00111 00130 std::vector<CellPtr> GetCryptSectionPeriodic(double yTop, 00131 double xBottom = DBL_MAX, //RandomNumberGenerator::Instance()->ranf()*crypt_width, 00132 double xTop = DBL_MAX); //RandomNumberGenerator::Instance()->ranf()*crypt_width, 00133 }; 00134 00135 #endif /*CRYPTSTATISTICS_HPP_*/