Chaste Release::3.1
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00001 /* 00002 00003 Copyright (c) 2005-2012, University of Oxford. 00004 All rights reserved. 00005 00006 University of Oxford means the Chancellor, Masters and Scholars of the 00007 University of Oxford, having an administrative office at Wellington 00008 Square, Oxford OX1 2JD, UK. 00009 00010 This file is part of Chaste. 00011 00012 Redistribution and use in source and binary forms, with or without 00013 modification, are permitted provided that the following conditions are met: 00014 * Redistributions of source code must retain the above copyright notice, 00015 this list of conditions and the following disclaimer. 00016 * Redistributions in binary form must reproduce the above copyright notice, 00017 this list of conditions and the following disclaimer in the documentation 00018 and/or other materials provided with the distribution. 00019 * Neither the name of the University of Oxford nor the names of its 00020 contributors may be used to endorse or promote products derived from this 00021 software without specific prior written permission. 00022 00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00033 00034 */ 00035 00036 00037 #ifndef DISTRIBUTEDVECTOR_HPP_ 00038 #define DISTRIBUTEDVECTOR_HPP_ 00039 00040 #include <vector> 00041 #include <petscvec.h> 00042 #include <iostream> 00043 #include <cassert> 00044 00045 #include "DistributedVectorException.hpp" 00046 00047 class DistributedVectorFactory; 00048 00055 class DistributedVector 00056 { 00057 private: 00058 friend class TestDistributedVector; 00059 00060 // Data global to all vectors 00061 00063 unsigned mLo; 00064 00066 unsigned mHi; 00067 00069 unsigned mProblemSize; 00070 00071 // Data local to a single vector 00072 00074 unsigned mSizeMultiplier; 00075 00077 Vec mVec; 00078 00080 double* mpVec; 00081 00086 DistributedVectorFactory* mpFactory; 00087 00088 public: 00089 00095 bool IsGlobalIndexLocal(unsigned globalIndex); 00096 00106 DistributedVector(Vec vec, DistributedVectorFactory* pFactory); 00107 00111 unsigned GetHigh() const 00112 { 00113 return mHi; 00114 } 00115 00119 unsigned GetLow() const 00120 { 00121 return mLo; 00122 } 00123 00127 DistributedVectorFactory* GetFactory() 00128 { 00129 return mpFactory; 00130 } 00131 00139 double& operator[](unsigned globalIndex) throw (DistributedVectorException); 00140 00146 void Restore(); 00147 00152 class Iterator 00153 { 00154 public: 00155 unsigned Local; 00156 unsigned Global; 00163 bool operator!=(const Iterator& rOther); 00164 00166 Iterator& operator++(); 00167 }; 00168 00176 class Stripe 00177 { 00178 unsigned mStride; 00179 unsigned mStripe; 00180 double* mpVec; 00181 unsigned mLo; 00182 unsigned mHi; 00183 DistributedVectorFactory* mpFactory; 00185 public: 00192 Stripe(DistributedVector parallelVec, unsigned stripe) 00193 { 00194 mStride = parallelVec.mSizeMultiplier; 00195 mStripe = stripe; 00196 assert(mStripe < mStride); 00197 mpVec = parallelVec.mpVec; 00198 mLo = parallelVec.GetLow(); 00199 mHi = parallelVec.GetHigh(); 00200 mpFactory = parallelVec.GetFactory(); 00201 } 00202 00206 DistributedVectorFactory* GetFactory() 00207 { 00208 return mpFactory; 00209 } 00210 00219 double& operator[](unsigned globalIndex) throw (DistributedVectorException) 00220 { 00221 if (mLo <= globalIndex && globalIndex < mHi) 00222 { 00223 return mpVec[(globalIndex - mLo)*mStride + mStripe]; 00224 } 00225 throw DistributedVectorException(); 00226 } 00227 00232 double& operator[](Iterator index) throw (DistributedVectorException) 00233 { 00234 return mpVec[index.Local*mStride + mStripe]; 00235 } 00236 00237 }; 00238 00246 class Chunk 00247 { 00248 unsigned mOffset; 00249 double* mpVec; 00250 unsigned mLo; 00251 unsigned mHi; 00253 public: 00260 Chunk(DistributedVector parallelVec, unsigned chunk) 00261 { 00262 assert(chunk < parallelVec.mSizeMultiplier); 00263 mLo = parallelVec.GetLow(); 00264 mHi = parallelVec.GetHigh(); 00265 mOffset = chunk * (mHi - mLo); 00266 mpVec = parallelVec.mpVec; 00267 } 00268 00277 double& operator[](unsigned globalIndex) throw (DistributedVectorException) 00278 { 00279 if (mLo <= globalIndex && globalIndex < mHi) 00280 { 00281 //localIndex = globalIndex - mLo 00282 return mpVec[mOffset + globalIndex - mLo]; 00283 } 00284 throw DistributedVectorException(); 00285 } 00286 00291 double& operator[](Iterator index) throw (DistributedVectorException) 00292 { 00293 return mpVec[mOffset + index.Local]; 00294 } 00295 00296 }; 00297 00302 Iterator Begin(); 00303 00308 Iterator End(); 00309 00315 double& operator[](Iterator index) throw (DistributedVectorException); 00316 }; 00317 00318 #endif /*DISTRIBUTEDVECTOR_HPP_*/