Chaste Release::3.1
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00001 /* 00002 00003 Copyright (c) 2005-2012, University of Oxford. 00004 All rights reserved. 00005 00006 University of Oxford means the Chancellor, Masters and Scholars of the 00007 University of Oxford, having an administrative office at Wellington 00008 Square, Oxford OX1 2JD, UK. 00009 00010 This file is part of Chaste. 00011 00012 Redistribution and use in source and binary forms, with or without 00013 modification, are permitted provided that the following conditions are met: 00014 * Redistributions of source code must retain the above copyright notice, 00015 this list of conditions and the following disclaimer. 00016 * Redistributions in binary form must reproduce the above copyright notice, 00017 this list of conditions and the following disclaimer in the documentation 00018 and/or other materials provided with the distribution. 00019 * Neither the name of the University of Oxford nor the names of its 00020 contributors may be used to endorse or promote products derived from this 00021 software without specific prior written permission. 00022 00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00033 00034 */ 00035 00036 #include "NonCachedTetrahedralMesh.hpp" 00037 #include "Exception.hpp" 00038 00039 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM> 00040 void NonCachedTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>::RefreshJacobianCachedData() 00041 { 00042 // Don't do any caching 00043 } 00044 00045 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM> 00046 void NonCachedTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>::GetJacobianForElement(unsigned elementIndex, c_matrix<double, SPACE_DIM, SPACE_DIM>& rJacobian, double& rJacobianDeterminant) const 00047 { 00048 EXCEPTION("Use GetInverseJacobianForElement to retrieve Jacobian data instead."); 00049 } 00050 00051 00052 template <unsigned ELEMENT_DIM, unsigned SPACE_DIM> 00053 void NonCachedTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>::GetInverseJacobianForElement( 00054 unsigned elementIndex, 00055 c_matrix<double, SPACE_DIM, ELEMENT_DIM>& rJacobian, 00056 double& rJacobianDeterminant, 00057 c_matrix<double, ELEMENT_DIM, SPACE_DIM>& rInverseJacobian) const 00058 { 00059 this->mElements[this->SolveElementMapping(elementIndex)]->CalculateInverseJacobian(rJacobian, rJacobianDeterminant, rInverseJacobian); 00060 } 00061 00062 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM> 00063 void NonCachedTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>::GetWeightedDirectionForElement(unsigned elementIndex, c_vector<double, SPACE_DIM>& rWeightedDirection, double& rJacobianDeterminant) const 00064 { 00065 // See comment in AbstractTetrahedralMesh::GetWeightedDirectionForBoundaryElement() 00066 EXCEPTION("Probably redundant method."); 00067 } 00068 00069 template <unsigned ELEMENT_DIM, unsigned SPACE_DIM> 00070 void NonCachedTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>::GetWeightedDirectionForBoundaryElement( 00071 unsigned elementIndex, 00072 c_vector<double, SPACE_DIM>& rWeightedDirection, 00073 double& rJacobianDeterminant) const 00074 { 00075 this->mBoundaryElements[this->SolveBoundaryElementMapping(elementIndex)]->CalculateWeightedDirection(rWeightedDirection, rJacobianDeterminant ); 00076 } 00077 00078 00080 // Explicit instantiation 00082 00083 template class NonCachedTetrahedralMesh<3,3>; 00084 template class NonCachedTetrahedralMesh<2,2>; 00085 template class NonCachedTetrahedralMesh<1,1>; 00086 00087 00088 // Serialization for Boost >= 1.36 00089 #include "SerializationExportWrapperForCpp.hpp" 00090 EXPORT_TEMPLATE_CLASS2(NonCachedTetrahedralMesh, 1, 1) 00091 EXPORT_TEMPLATE_CLASS2(NonCachedTetrahedralMesh, 2, 2) 00092 EXPORT_TEMPLATE_CLASS2(NonCachedTetrahedralMesh, 3, 3)