RadialSloughingCellKiller.hpp

/*

Copyright (c) 2005-2012, University of Oxford.
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This file is part of Chaste.

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 * Redistributions of source code must retain the above copyright notice,
   this list of conditions and the following disclaimer.
 * Redistributions in binary form must reproduce the above copyright notice,
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   software without specific prior written permission.

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*/

#ifndef RADIALSLOUGHINGCELLKILLER_HPP_
#define RADIALSLOUGHINGCELLKILLER_HPP_

#include "AbstractCellKiller.hpp"

#include "ChasteSerialization.hpp"
#include <boost/serialization/base_object.hpp>

class RadialSloughingCellKiller : public AbstractCellKiller<2>
{
private:

    c_vector<double,2> mCentre;

    double mRadius;

    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<AbstractCellKiller<2> >(*this);
    }

public:

    RadialSloughingCellKiller(AbstractCellPopulation<2>* pCellPopulation,
                              c_vector<double,2> centre,
                              double radius);

    c_vector<double,2> GetCentre() const;

    double GetRadius() const;

    virtual void CheckAndLabelCellsForApoptosisOrDeath();

    void OutputCellKillerParameters(out_stream& rParamsFile);
};

#include "SerializationExportWrapper.hpp"
CHASTE_CLASS_EXPORT(RadialSloughingCellKiller)

namespace boost
{
namespace serialization
{
template<class Archive>
inline void save_construct_data(
    Archive & ar, const RadialSloughingCellKiller * t, const BOOST_PFTO unsigned int file_version)
{
    // Save data required to construct instance
    const AbstractCellPopulation<2>* const p_cell_population = t->GetCellPopulation();
    ar & p_cell_population;
    c_vector<double,2> centre = t->GetCentre();
    ar & centre[0];
    ar & centre[1];
    double radius = t->GetRadius();
    ar & radius;
}

template<class Archive>
inline void load_construct_data(
    Archive & ar, RadialSloughingCellKiller * t, const unsigned int file_version)
{
    // Retrieve data from archive required to construct new instance
    AbstractCellPopulation<2>* p_cell_population;
    ar & p_cell_population;
    c_vector<double,2> centre;
    ar & centre[0];
    ar & centre[1];
    double radius;
    ar & radius;

    // Invoke inplace constructor to initialise instance
    ::new(t)RadialSloughingCellKiller(p_cell_population, centre, radius);
}
}
} // namespace ...


#endif /*RADIALSLOUGHINGCELLKILLER_HPP_*/