SimpleOxygenBasedCellCycleModel.hpp

/*

Copyright (c) 2005-2012, University of Oxford.
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*/

#ifndef SIMPLEOXYGENBASEDCELLCYCLEMODEL_HPP_
#define SIMPLEOXYGENBASEDCELLCYCLEMODEL_HPP_

#include "AbstractSimpleCellCycleModel.hpp"

class SimpleOxygenBasedCellCycleModel : public AbstractSimpleCellCycleModel
{
private:

    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<AbstractSimpleCellCycleModel>(*this);
        archive & mCurrentHypoxicDuration;
        archive & mCurrentHypoxiaOnsetTime;
        archive & mHypoxicConcentration;
        archive & mQuiescentConcentration;
        archive & mCriticalHypoxicDuration;
    }

protected:

    double mCurrentHypoxicDuration;

    double mCurrentHypoxiaOnsetTime;

    double mHypoxicConcentration;

    double mQuiescentConcentration;

    double mCriticalHypoxicDuration;

public:

    SimpleOxygenBasedCellCycleModel();

    void UpdateCellCyclePhase();

    void UpdateHypoxicDuration();

    double GetCurrentHypoxicDuration();

    double GetCurrentHypoxiaOnsetTime();

    AbstractCellCycleModel* CreateCellCycleModel();

    double GetHypoxicConcentration();

    void SetHypoxicConcentration(double hypoxicConcentration);

    double GetQuiescentConcentration();

    void SetQuiescentConcentration(double quiescentConcentration);

    double GetCriticalHypoxicDuration();

    void SetCriticalHypoxicDuration(double criticalHypoxicDuration);

    void SetCurrentHypoxiaOnsetTime(double currentHypoxiaOnsetTime);

    virtual void OutputCellCycleModelParameters(out_stream& rParamsFile);
};

// Declare identifier for the serializer
#include "SerializationExportWrapper.hpp"
CHASTE_CLASS_EXPORT(SimpleOxygenBasedCellCycleModel)

#endif /*SIMPLEOXYGENBASEDCELLCYCLEMODEL_HPP_*/