StochasticWntCellCycleModel.hpp

/*

Copyright (c) 2005-2012, University of Oxford.
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*/

#ifndef STOCHASTICWNTCELLCYCLEMODEL_HPP_
#define STOCHASTICWNTCELLCYCLEMODEL_HPP_

#include "ChasteSerialization.hpp"
#include <boost/serialization/base_object.hpp>

#include "WntCellCycleModel.hpp"
#include "RandomNumberGenerator.hpp"

class StochasticWntCellCycleModel : public WntCellCycleModel
{
private:

    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<WntCellCycleModel>(*this);

        // Make sure the random number generator is also archived
        SerializableSingleton<RandomNumberGenerator>* p_rng_wrapper = RandomNumberGenerator::Instance()->GetSerializationWrapper();
        archive & p_rng_wrapper;

        archive & mStochasticG2Duration;
    }

    double mStochasticG2Duration;

    void GenerateStochasticG2Duration();

public:

    StochasticWntCellCycleModel(boost::shared_ptr<AbstractCellCycleModelOdeSolver> pOdeSolver = boost::shared_ptr<AbstractCellCycleModelOdeSolver>());

    AbstractCellCycleModel* CreateCellCycleModel();

    void InitialiseDaughterCell();

    void Initialise();

    void ResetForDivision();

    double GetG2Duration();

    virtual void OutputCellCycleModelParameters(out_stream& rParamsFile);
};

// Declare identifier for the serializer
#include "SerializationExportWrapper.hpp"
CHASTE_CLASS_EXPORT(StochasticWntCellCycleModel)
#include "CellCycleModelOdeSolverExportWrapper.hpp"
EXPORT_CELL_CYCLE_MODEL_ODE_SOLVER(StochasticWntCellCycleModel)

#endif /*STOCHASTICWNTCELLCYCLEMODEL_HPP_*/