Chaste  Release::3.4
AbstractHdf5Converter.hpp
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35 
36 #ifndef ABSTRACTHDF5CONVERTER_HPP_
37 #define ABSTRACTHDF5CONVERTER_HPP_
38 
39 #include <string>
40 #include "AbstractTetrahedralMesh.hpp"
41 #include "OutputFileHandler.hpp"
42 #include "Hdf5DataReader.hpp"
43 
44 
49 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
51 {
52 private:
59  void GenerateListOfDatasets(const FileFinder& rH5Folder, const std::string& rFileName);
60 
61 protected:
62 
65 
67  boost::shared_ptr<Hdf5DataReader> mpReader;
68 
70  unsigned mNumVariables;
71 
73  std::string mFileBaseName;
74 
81  std::vector<std::string> mDatasetNames;
82 
87 
90 
93 
98  std::string mRelativeSubdirectory;
99 
104  unsigned mPrecision;
105 
113  bool MoveOntoNextDataset();
114 
115 public:
116 
128  AbstractHdf5Converter(const FileFinder& rInputDirectory,
129  const std::string& rFileBaseName,
131  const std::string& rSubdirectoryName,
132  unsigned precision);
133 
137  void WriteInfoFile();
138 
143 
147  std::string GetSubdirectory();
148 };
149 
150 #endif /*ABSTRACTHDF5CONVERTER_HPP_*/
boost::shared_ptr< Hdf5DataReader > mpReader
OutputFileHandler * mpOutputFileHandler
const FileFinder & mrH5Folder
std::vector< std::string > mDatasetNames
AbstractHdf5Converter(const FileFinder &rInputDirectory, const std::string &rFileBaseName, AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, const std::string &rSubdirectoryName, unsigned precision)
AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > * mpMesh
void GenerateListOfDatasets(const FileFinder &rH5Folder, const std::string &rFileName)