AbstractLinearParabolicPdeSystemForCoupledOdeSystem.hpp

/*

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*/

#ifndef ABSTRACTLINEARPARABOLICPDESYSTEMFORCOUPLEDODESYSTEM_HPP_
#define ABSTRACTLINEARPARABOLICPDESYSTEMFORCOUPLEDODESYSTEM_HPP_

#include "UblasCustomFunctions.hpp"
#include "ChastePoint.hpp"
#include "Node.hpp"
#include "Element.hpp"
#include <petscvec.h>

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM=ELEMENT_DIM, unsigned PROBLEM_DIM=1>
class AbstractLinearParabolicPdeSystemForCoupledOdeSystem
{
public:
    virtual double ComputeDuDtCoefficientFunction(const ChastePoint<SPACE_DIM>& rX, unsigned pdeIndex)=0;

    virtual double ComputeSourceTerm(const ChastePoint<SPACE_DIM>& rX,
                                     c_vector<double,PROBLEM_DIM>& rU,
                                     std::vector<double>& rOdeSolution,
                                     unsigned pdeIndex)=0;

    virtual double ComputeSourceTermAtNode(const Node<SPACE_DIM>& rNode,
                                           c_vector<double,PROBLEM_DIM>& rU,
                                           std::vector<double>& rOdeSolution,
                                           unsigned pdeIndex);

    virtual c_matrix<double, SPACE_DIM, SPACE_DIM> ComputeDiffusionTerm(const ChastePoint<SPACE_DIM>& rX,
                                                                        unsigned pdeIndex,
                                                                        Element<ELEMENT_DIM,SPACE_DIM>* pElement=NULL)=0;

    virtual ~AbstractLinearParabolicPdeSystemForCoupledOdeSystem()
    {}
};

// Implementation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM, unsigned PROBLEM_DIM>
double AbstractLinearParabolicPdeSystemForCoupledOdeSystem<ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM>::ComputeSourceTermAtNode(const Node<SPACE_DIM>& rNode, c_vector<double,PROBLEM_DIM>& rU, std::vector<double>& rOdeSolution, unsigned pdeIndex)
{
    return ComputeSourceTerm(rNode.GetPoint(), rU, rOdeSolution, pdeIndex);
}

#endif /*ABSTRACTLINEARPARABOLICPDESYSTEMFORCOUPLEDODESYSTEM_HPP_*/