AbstractTargetAreaModifier.hpp

/*

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*/

#ifndef ABSTRACTTARGETAREAMODIFIER_HPP_
#define ABSTRACTTARGETAREAMODIFIER_HPP_

#include "ChasteSerialization.hpp"
#include <boost/serialization/base_object.hpp>
#include "AbstractCellBasedSimulationModifier.hpp"
#include "VertexBasedCellPopulation.hpp"

template<unsigned DIM>
class AbstractTargetAreaModifier : public AbstractCellBasedSimulationModifier<DIM,DIM>
{
    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<AbstractCellBasedSimulationModifier<DIM,DIM> >(*this);
        archive & mReferenceTargetArea;
    }

protected:

    double mReferenceTargetArea;

public:

    AbstractTargetAreaModifier();

    virtual ~AbstractTargetAreaModifier();

    virtual void UpdateAtEndOfTimeStep(AbstractCellPopulation<DIM,DIM>& rCellPopulation);

    virtual void SetupSolve(AbstractCellPopulation<DIM,DIM>& rCellPopulation, std::string outputDirectory);

    double GetReferenceTargetArea();

    void SetReferenceTargetArea(double referenceTargetArea);

    void UpdateTargetAreas(AbstractCellPopulation<DIM,DIM>& rCellPopulation);

    virtual void UpdateTargetAreaOfCell(const CellPtr pCell)=0;

    virtual void OutputSimulationModifierParameters(out_stream& rParamsFile);
};

TEMPLATED_CLASS_IS_ABSTRACT_1_UNSIGNED(AbstractTargetAreaModifier)

#endif /*ABSRACTTARGETAREAMODIFIER_HPP_*/