CellBasedPdeHandlerOnCuboid.hpp

/*

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*/

#ifndef CELLBASEDPDEHANDLERONCUBOID_HPP_
#define CELLBASEDPDEHANDLERONCUBOID_HPP_

#include <map>
#include <memory>

#include "ChasteSerialization.hpp"
#include <boost/serialization/vector.hpp>

#include "CellBasedPdeHandler.hpp"

template<unsigned DIM>
class CellBasedPdeHandlerOnCuboid : public CellBasedPdeHandler<DIM>
{
    // Allow tests to access private members, in order to test computation of private functions
    friend class TestCellBasedPdeHandler;
    friend class TestOffLatticeSimulationWithPdes;
    friend class TestOnLatticeSimulationWithPdes;

private:

    std::vector<ConstBoundaryCondition<DIM>* > mConstBoundaryConditions;

    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<CellBasedPdeHandler<DIM> >(*this);
    }

public:

    CellBasedPdeHandlerOnCuboid(AbstractCellPopulation<DIM>* pCellPopulation, bool deleteMemberPointersInDestructor=false);

    virtual ~CellBasedPdeHandlerOnCuboid();

    std::auto_ptr<BoundaryConditionsContainer<DIM,DIM,1> > ConstructBoundaryConditionsContainer(
            PdeAndBoundaryConditions<DIM>* pPdeAndBc,
            TetrahedralMesh<DIM,DIM>* pMesh);

    virtual void OutputParameters(out_stream& rParamsFile);
};

#include "SerializationExportWrapper.hpp"
EXPORT_TEMPLATE_CLASS_SAME_DIMS(CellBasedPdeHandlerOnCuboid)

namespace boost
{
namespace serialization
{
template<class Archive, unsigned DIM>
inline void save_construct_data(
    Archive & ar, const CellBasedPdeHandlerOnCuboid<DIM> * t, const unsigned int file_version)
{
    // Save data required to construct instance
    const AbstractCellPopulation<DIM>* p_cell_population = t->GetCellPopulation();
    ar & p_cell_population;
}

template<class Archive, unsigned DIM>
inline void load_construct_data(
    Archive & ar, CellBasedPdeHandlerOnCuboid<DIM> * t, const unsigned int file_version)
{
    // Retrieve data from archive required to construct new instance
    AbstractCellPopulation<DIM>* p_cell_population;
    ar >> p_cell_population;

    // Invoke inplace constructor to initialise instance
    ::new(t)CellBasedPdeHandlerOnCuboid<DIM>(p_cell_population, true);
}
}
}

#endif /*CELLBASEDPDEHANDLERONCUBOID_HPP_*/