Chaste  Release::3.4
CellBasedPdeSolver.hpp
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35 
36 #ifndef CELLBASEDPDESOLVER_HPP_
37 #define CELLBASEDPDESOLVER_HPP_
38 
39 #include "SimpleLinearEllipticSolver.hpp"
40 #include "TetrahedralMesh.hpp"
41 
47 template<unsigned DIM>
49  : public SimpleLinearEllipticSolver<DIM, DIM>
50 {
51 private:
52 
55 
58 
59 protected:
60 
74  virtual c_vector<double, 1*(DIM+1)> ComputeVectorTerm(
75  c_vector<double, DIM+1>& rPhi,
76  c_matrix<double, DIM, DIM+1>& rGradPhi,
77  ChastePoint<DIM>& rX,
78  c_vector<double, 1>& rU,
79  c_matrix<double, 1, DIM>& rGradU /* not used */,
80  Element<DIM, DIM>* pElement);
81 
95  virtual c_matrix<double, 1*(DIM+1), 1*(DIM+1)> ComputeMatrixTerm(
96  c_vector<double, DIM+1>& rPhi,
97  c_matrix<double, DIM, DIM+1>& rGradPhi,
98  ChastePoint<DIM>& rX,
99  c_vector<double, 1>& rU,
100  c_matrix<double, 1, DIM>& rGradU,
101  Element<DIM, DIM>* pElement);
102 
107 
114  void IncrementInterpolatedQuantities(double phiI, const Node<DIM>* pNode);
115 
122  void InitialiseForSolve(Vec initialSolution);
123 
124 public:
125 
135  BoundaryConditionsContainer<DIM,DIM,1>* pBoundaryConditions);
136 
140  virtual ~CellBasedPdeSolver();
141 };
142 
143 #endif /*CELLBASEDPDESOLVER_HPP_*/
virtual c_vector< double, 1 *(DIM+1)> ComputeVectorTerm(c_vector< double, DIM+1 > &rPhi, c_matrix< double, DIM, DIM+1 > &rGradPhi, ChastePoint< DIM > &rX, c_vector< double, 1 > &rU, c_matrix< double, 1, DIM > &rGradU, Element< DIM, DIM > *pElement)
Definition: Node.hpp:58
void InitialiseForSolve(Vec initialSolution)
virtual c_matrix< double, 1 *(DIM+1), 1 *(DIM+1)> ComputeMatrixTerm(c_vector< double, DIM+1 > &rPhi, c_matrix< double, DIM, DIM+1 > &rGradPhi, ChastePoint< DIM > &rX, c_vector< double, 1 > &rU, c_matrix< double, 1, DIM > &rGradU, Element< DIM, DIM > *pElement)
CellBasedPdeSolver(TetrahedralMesh< DIM, DIM > *pMesh, AbstractLinearEllipticPde< DIM, DIM > *pPde, BoundaryConditionsContainer< DIM, DIM, 1 > *pBoundaryConditions)
void IncrementInterpolatedQuantities(double phiI, const Node< DIM > *pNode)