Chaste  Release::3.4
DiffusionCaUpdateRule.hpp
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35 
36 #ifndef DIFFUSIONCAUPDATERULE_HPP_
37 #define DIFFUSIONCAUPDATERULE_HPP_
38 
39 #include "ChasteSerialization.hpp"
40 #include <boost/serialization/base_object.hpp>
41 
42 #include "AbstractCaUpdateRule.hpp"
43 #include "CaBasedCellPopulation.hpp"
44 
57 template<unsigned DIM>
59 {
60 friend class TestCaUpdateRules;
61 
62 private:
63 
70 
71  friend class boost::serialization::access;
79  template<class Archive>
80  void serialize(Archive & archive, const unsigned int version)
81  {
82  archive & boost::serialization::base_object<AbstractCaUpdateRule<DIM> >(*this);
83  archive & mDiffusionParameter;
84  }
85 
86 public:
87 
92 
97 
111  double EvaluateProbability(unsigned currentNodeIndex,
112  unsigned targetNodeIndex,
113  CaBasedCellPopulation<DIM>& rCellPopulation,
114  double dt,
115  double deltaX,
116  CellPtr cell);
117 
121  double GetDiffusionParameter();
122 
128  void SetDiffusionParameter(double diffusionParameter);
129 
135  void OutputUpdateRuleParameters(out_stream& rParamsFile);
136 };
137 
140 
141 #endif /*DIFFUSIONCAUPDATERULE_HPP_*/
void OutputUpdateRuleParameters(out_stream &rParamsFile)
#define EXPORT_TEMPLATE_CLASS_SAME_DIMS(CLASS)
double EvaluateProbability(unsigned currentNodeIndex, unsigned targetNodeIndex, CaBasedCellPopulation< DIM > &rCellPopulation, double dt, double deltaX, CellPtr cell)
void serialize(Archive &archive, const unsigned int version)
void SetDiffusionParameter(double diffusionParameter)