Chaste  Release::3.4
MonodomainTissue.hpp
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35 
36 
37 #ifndef MONODOMAINTISSUE_HPP_
38 #define MONODOMAINTISSUE_HPP_
39 
40 #include "ChasteSerialization.hpp"
41 #include <boost/serialization/vector.hpp>
42 #include <boost/serialization/base_object.hpp>
43 
44 #include <vector>
45 #include "AbstractCardiacTissue.hpp"
46 
47 
54 template <unsigned ELEMENT_DIM, unsigned SPACE_DIM = ELEMENT_DIM>
55 class MonodomainTissue : public virtual AbstractCardiacTissue<ELEMENT_DIM,SPACE_DIM>
56 {
57 private:
58  friend class TestMonodomainTissue;
59 
68  template<class Archive>
69  void serialize(Archive & archive, const unsigned int version)
70  {
71  archive & boost::serialization::base_object<AbstractCardiacTissue<ELEMENT_DIM, SPACE_DIM> >(*this);
72  }
73 
74 
75 public:
82  MonodomainTissue(AbstractCardiacCellFactory<ELEMENT_DIM,SPACE_DIM>* pCellFactory, bool exchangeHalos=false);
83 
90 };
91 
92 
93 // Declare identifier for the serializer
94 #include "SerializationExportWrapper.hpp" // Must be last
97 EXPORT_TEMPLATE_CLASS2(MonodomainTissue, 1, 3)
98 EXPORT_TEMPLATE_CLASS2(MonodomainTissue, 2, 2)
99 EXPORT_TEMPLATE_CLASS2(MonodomainTissue, 3, 3)
100 
101 namespace boost
102 {
103 namespace serialization
104 {
105 
106 template<class Archive, unsigned ELEMENT_DIM, unsigned SPACE_DIM>
107 inline void save_construct_data(
108  Archive & ar, const MonodomainTissue<ELEMENT_DIM, SPACE_DIM> * t, const unsigned int file_version)
109 {
111  ar & p_mesh;
112 
113  // CreateIntracellularConductivityTensor() is called by constructor and uses HeartConfig. So make sure that it is
114  // archived too (needs doing before construction so appears here instead of usual archive location).
115  HeartConfig* p_config = HeartConfig::Instance();
116  ar & *p_config;
117  ar & p_config;
118 }
119 
124 template<class Archive, unsigned ELEMENT_DIM, unsigned SPACE_DIM>
125 inline void load_construct_data(
126  Archive & ar, MonodomainTissue<ELEMENT_DIM, SPACE_DIM> * t, const unsigned int file_version)
127 {
129  ar & p_mesh;
130 
131  // CreateIntracellularConductivityTensor() is called by AbstractCardiacTissue constructor and uses HeartConfig.
132  // So make sure that it is archived too (needs doing before construction so appears here instead of usual archive location).
133  HeartConfig* p_config = HeartConfig::Instance();
134  ar & *p_config;
135  ar & p_config;
136 
137  ::new(t)MonodomainTissue<ELEMENT_DIM, SPACE_DIM>(p_mesh);
138 }
139 }
140 } // namespace ...
141 
142 
143 #endif /*MONODOMAINTISSUE_HPP_*/
MonodomainTissue(AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM > *pCellFactory, bool exchangeHalos=false)
void serialize(Archive &archive, const unsigned int version)
friend class boost::serialization::access
#define EXPORT_TEMPLATE_CLASS2(CLASS, E, S)
static HeartConfig * Instance()
const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > * pGetMesh() const