Chaste  Release::3.4
AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > Member List

This is the complete list of members for AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >, including all inherited members.

AbstractCellBasedSimulation(AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > &rCellPopulation, bool deleteCellPopulationInDestructor=false, bool initialiseCells=true)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
AddCellKiller(boost::shared_ptr< AbstractCellKiller< SPACE_DIM > > pCellKiller)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
AddSimulationModifier(boost::shared_ptr< AbstractCellBasedSimulationModifier< ELEMENT_DIM, SPACE_DIM > > pSimulationModifier)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
boost::serialization::access classAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >friend
CalculateCellDivisionVector(CellPtr pParentCell)=0AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protectedpure virtual
DoCellBirth()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protectedvirtual
DoCellRemoval()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
GetCellBasedPdeHandler()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetDt()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetIdentifier() const Identifiable
GetNodeLocation(const unsigned &rNodeIndex)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetNumBirths()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetNumDeaths()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetOutputCellVelocities()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetOutputDirectory()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetOutputDivisionLocations()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetSimulationModifiers()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetUpdateCellPopulationRule()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
mCellKillersAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mDeleteCellPopulationInDestructorAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mDtAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mEndTimeAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mInitialiseCellsAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mNoBirthAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mNumBirthsAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mNumDeathsAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mOutputCellVelocitiesAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mOutputDirectoryAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mOutputDivisionLocationsAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mpCellBasedPdeHandlerAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mpCellVelocitiesFileAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mpDivisionLocationFileAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mpVizSetupFileAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mrCellPopulationAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mSamplingTimestepMultipleAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mSimulationModifiersAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mSimulationOutputDirectoryAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
mUpdateCellPopulationAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
OutputAdditionalSimulationSetup(out_stream &rParamsFile)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >inlineprotectedvirtual
OutputSimulationParameters(out_stream &rParamsFile)=0AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >pure virtual
OutputSimulationSetup()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protected
RemoveAllCellKillers()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
rGetCellPopulation()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
rGetCellPopulation() const AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
serialize(Archive &archive, const unsigned int version)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >inlineprivate
SetCellBasedPdeHandler(CellBasedPdeHandler< SPACE_DIM > *pCellBasedPdeHandler)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetDt(double dt)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetEndTime(double endTime)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetNoBirth(bool noBirth)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetOutputCellVelocities(bool outputCellVelocities)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetOutputDirectory(std::string outputDirectory)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetOutputDivisionLocations(bool outputDivisionLocations)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetSamplingTimestepMultiple(unsigned samplingTimestepMultiple)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetUpdateCellPopulationRule(bool updateCellPopulation)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetupSolve()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >inlineprotectedvirtual
Solve()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
StoppingEventHasOccurred()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protectedvirtual
TestCryptSimulation2d (defined in AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >friend
TestOffLatticeSimulation (defined in AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >friend
TestOffLatticeSimulation3d (defined in AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >friend
UpdateCellLocationsAndTopology()=0AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protectedpure virtual
UpdateCellPopulation()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >protectedvirtual
WriteVisualizerSetupFile()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >inlineprotectedvirtual
~AbstractCellBasedSimulation()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >virtual
~Identifiable()Identifiablevirtual