Chaste  Release::3.4
Class Index
A | B | C | D | E | F | G | H | I | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Z
  A  
ApoptoticCellKiller   Node::ContainingBoundaryElementIterator   
  M  
MeshBasedCellPopulation::SpringIterator   
ApoptoticCellProperty   Node::ContainingElementIterator   S1S2Stimulus   
AbstractAlgebraicContractionModel   ArchiveLocationInfo   
  D  
MassMatrixAssembler   SchmidCostaExponentialLaw2d   
AbstractAssemblerSolverHybrid   ArchiveOpener   MechanicsEventHandler   SerializableSingleton   
AbstractBackwardEulerCardiacCell   AveragedSourcePde   DataAtQuadraturePoint_   MemfemMeshReader   ShortAxisVertexBasedDivisionRule   
AbstractBackwardEulerCardiacCell< 0u >   AxisymmetricConductivityTensors   DataWriterVariable   MeshalyzerMeshWriter   SimpleDataWriter   
AbstractBidomainSolver   
  B  
DefaultCellProliferativeType   MeshBasedCellPopulation   SimpleLinearEllipticSolver   
AbstractBoundaryCondition   DeltaNotchOdeSystem   MeshBasedCellPopulationWithGhostNodes   SimpleLinearParabolicSolver   
AbstractBoundaryConditionsContainer   BackwardEulerIvpOdeSolver   DeltaNotchSrnModel   MeshEventHandler   SimpleNewtonNonlinearSolver   
AbstractCaBasedDivisionRule   BathCellFactory   DeltaNotchTrackingModifier   MeshPottsWriterIterators   SimpleNonlinearEllipticSolver   
AbstractCachedMeshReader   BetaCateninOneHitCellMutationState   DiagonalVertexBasedDivisionRule   MeshWriterIterators   SimpleOxygenBasedCellCycleModel   
AbstractCardiacCell   BidomainAssembler   DifferentialAdhesionGeneralisedLinearSpringForce   Mirams2010WntOdeSystem   SimplePetscNonlinearSolver   
AbstractCardiacCellFactory   BidomainCorrectionTermAssembler   DifferentialAdhesionPottsUpdateRule   MixedDimensionMesh   SimpleStimulus   
AbstractCardiacCellInterface   BidomainMassMatrixAssembler   DifferentiatedCellProliferativeType   MockEulerIvpOdeSolver   SimpleTargetAreaModifier   
AbstractCardiacCellWithModifiers   BidomainNeumannSurfaceTermAssembler   DiffusionCaUpdateRule   MonodomainAssembler   SimpleUniformSourcePde   
AbstractCardiacFeVolumeIntegralAssembler   BidomainProblem   DiffusionForce   MonodomainCorrectionTermAssembler   SimpleWntCellCycleModel   
AbstractCardiacMechanicsSolver   BidomainSolver   DiscreteSystemForceCalculator   MonodomainProblem   SimulationTime   
AbstractCardiacMechanicsSolverInterface   BidomainTissue   DistanceMapCalculator   MonodomainSolver   SingleOdeWntCellCycleModel   
AbstractCardiacProblem   BidomainWithBathAssembler   DistributedBoxCollection   MonodomainStiffnessMatrixAssembler   SingleTraceOutputModifier   
AbstractCardiacTissue   BidomainWithBathProblem   DistributedQuadraticMesh   MonodomainTissue   SloughingCellKiller   
AbstractCaSwitchingUpdateRule   BoundaryConditionsContainer   DistributedTetrahedralMesh   MooneyRivlinMaterialLaw   SolidMechanicsProblemDefinition   
AbstractCaUpdateRule   BoundaryElement   DistributedTetrahedralMeshPartitionType   MultiStimulus   SpaceConvergenceTester   
AbstractCellBasedSimulation   BoundaryNodeWriter   DistributedVector   MutableElement   SphereGeometryBoundaryCondition   
AbstractCellBasedSimulationModifier   Box   DistributedVectorException   MutableElement< 1, SPACE_DIM >   SteadyStateRestitutionStimulus   
AbstractCellBasedTestSuite   BoxCollection   DistributedVectorFactory   MutableMesh   SteadyStateRunner   
AbstractCellBasedWithTimingsTestSuite   BuskeAdhesiveForce   DummyModifier   MutableVertexMesh   StemCellProliferativeType   
AbstractCellBasedWriter   BuskeCompressionForce   DynamicCellModelLoader   
  N  
StiffnessMatrixAssembler   
AbstractCellCycleModel   BuskeElasticForce   DynamicModelLoaderRegistry   StimulusBoundaryCondition   
AbstractCellCycleModelOdeSolver   
  C  
  E  
AbstractMesh::NodeIterator   StochasticDurationCellCycleModel   
AbstractCellKiller   AbstractMeshReader::NodeIterator   StochasticDurationGenerationBasedCellCycleModel   
AbstractCellMutationState   CaBasedCellPopulation   AbstractLookupTableCollection::EventHandler   NagaiHondaDifferentialAdhesionForce   StochasticOxygenBasedCellCycleModel   
AbstractCellPopulation   CARDIAC_CELL   AbstractMeshReader::ElementIterator   NagaiHondaForce   StochasticWntCellCycleModel   
AbstractCellPopulationBoundaryCondition   CardiacElectroMechanicsProblem   AbstractTetrahedralMesh::ElementIterator   Nash2004ContractionModel   StokesFlowAssembler   
AbstractCellPopulationCountWriter   CardiacElectroMechProbRegularGeom   ELASTICITY_SOLVER   NashHunterPoleZeroLaw   StokesFlowPreconditionerAssembler   
AbstractCellPopulationWriter   CardiacNewtonSolver   Electrodes   NaturalNeumannSurfaceTermAssembler   StokesFlowProblemDefinition   
AbstractCellProliferativeType   CardiacSimulation   ElectrodesStimulusFactory   NhsContractionModel   StokesFlowSolver   
AbstractCellProperty   CardiacSimulationArchiver   ElectroMechanicsProblemDefinition   NhsModelWithBackwardSolver   StreeterFibreGenerator   
AbstractCellWriter   Cell   Element   Node   StressPerElementWriter   
AbstractCentreBasedCellPopulation   CellAgesWriter   ElementAndWeights   NodeAttributes   StressRecoveror   
AbstractChasteRegion   CellAncestor   ElementAttributes   NodeBasedCellPopulation   SurfaceAreaConstraintPottsUpdateRule   
AbstractCompressibleMaterialLaw   CellAncestorWriter   ElementData   NodeBasedCellPopulationWithBuskeUpdate   
  T  
AbstractConductivityModifier   CellBasedEventHandler   EulerIvpOdeSolver   NodeBasedCellPopulationWithParticles   
AbstractConductivityTensors   CellBasedPdeHandler   Exception   NodeLocationWriter   T2SwapCellKiller   
AbstractContinuumMechanicsAssembler   CellBasedPdeHandlerOnCuboid   ExclusionCaBasedDivisionRule   NodeMap   TargetedCellKiller   
AbstractContinuumMechanicsSolver   CellBasedPdeSolver   ExecutableSupport   NodePartitioner   TetrahedralMesh   
AbstractContractionCellFactory   CellBasedSimulationArchiver   ExplicitCardiacMechanicsSolver   NodesOnlyMesh   TimeModifier   
AbstractContractionModel   CellBetaCateninWriter   ExponentiallyDistributedStochasticDurationGenerationBasedCellCycleModel   NodeVelocityWriter   Timer   
AbstractConvergenceTester   CellCycleModelOdeHandler   ExponentialMaterialLaw   NonCachedTetrahedralMesh   TimeStepper   
AbstractCorrectionTermAssembler   CellCycleModelOdeSolver   ExtendedBidomainAssembler   NonlinearElasticityTools   Toroidal2dVertexMesh   
AbstractCryptStatistics   CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >   ExtendedBidomainMassMatrixAssembler   NonPhysiologicalContractionModel   ToroidalHoneycombVertexMeshGenerator   
AbstractCvodeCell   CellCycleModelProteinConcentrationsWriter   ExtendedBidomainNeumannSurfaceTermAssembler   NullSrnModel   TransitCellProliferativeType   
AbstractCvodeCellWithDataClamp   CellData   ExtendedBidomainProblem   NumericFileComparison   TrianglesMeshReader   
AbstractCvodeSystem   CellDeltaNotchWriter   ExtendedBidomainSolver   
  O  
TrianglesMeshWriter   
AbstractDataReader   CellId   ExtendedBidomainTissue   TysonNovak2001OdeSystem   
AbstractDataWriter   CellIdWriter   TetrahedralMesh::EdgeIterator   ObjectCommunicator   TysonNovakCellCycleModel   
AbstractDynamicallyLoadableEntity   CellLabel   
  F  
OdeConvergenceTester   
  V  
AbstractDynamicLinearPdeSolver   CellLabelWriter   OdeLinearSystemSolver   
AbstractElement   CellLocationIndexWriter   FactorModifier   OdePdeConvergenceTester   CombinedOdeSystem::VariableParameterMap   
AbstractExtendedBidomainSolver   CellMLLoader   FakeBathCell   OdeSolution   VanLeeuwen2009WntSwatCellCycleModelHypothesisOne   
AbstractFeAssemblerCommon   CellMLToSharedLibraryConverter   FakeBathContractionModel   OdeSystemForCoupledHeatEquation   VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo   
AbstractFeAssemblerInterface   CellMutationStatesCountWriter   FarhadifarForce   OdeSystemForCoupledHeatEquationWithSource   VanLeeuwen2009WntSwatCellCycleOdeSystem   
AbstractFeCableIntegralAssembler   CellMutationStatesWriter   FarhadifarTypeModifier   OdeSystemInformation   VertexBasedCellPopulation   
AbstractFeSurfaceIntegralAssembler   CellPopulationAdjacencyMatrixWriter   FemlabMeshReader   OffLatticeSimulation   VertexCryptBoundaryForce   
AbstractFeVolumeIntegralAssembler   CellPopulationAreaWriter   FibreConverter   OnLatticeSimulation   VertexElement   
AbstractFileComparison   CellPopulationElementWriter   FibreReader   OperatorSplittingMonodomainSolver   VertexElement< 1, SPACE_DIM >   
AbstractForce   CellProliferativePhasesCountWriter   FibreWriter   OrthotropicConductivityTensors   VertexElementData   
AbstractFunctionalCalculator   CellProliferativePhasesWriter   FileComparison   OutputDirectoryFifoQueue   VertexElementMap   
AbstractGeneralizedRushLarsenCardiacCell   CellProliferativeTypesCountWriter   FileFinder   OutputFileHandler   VertexMesh   
AbstractHdf5Access   CellProliferativeTypesWriter   FineCoarseMeshPair   
  P  
VertexMesh::VertexElementIterator   
AbstractHdf5Converter   CellProperties   FitzHughNagumo1961OdeSystem   VertexMeshReader   
AbstractIncompressibleMaterialLaw   CellPropertyCollection   FixedDurationGenerationBasedCellCycleModel   PapillaryFibreCalculator   VertexMeshWriter   
AbstractIsotropicCompressibleMaterialLaw   CellPropertyRegistry   FixedModifier   ParallelCellsGenerator   VertexT1SwapLocationsWriter   
AbstractIsotropicIncompressibleMaterialLaw   CellRadiusWriter   FourthOrderTensor   ParallelColumnDataWriter   VertexT2SwapLocationsWriter   
AbstractIvpOdeSolver   CellRosetteRankWriter   FunctionalBoundaryCondition   PCBlockDiagonal   VertexT3SwapLocationsWriter   
AbstractLinearEllipticPde   CellsGenerator   XmlTools::Finalizer   PCBlockDiagonal::PCBlockDiagonalContext   VoltageInterpolaterOntoMechanicsMesh   
AbstractLinearParabolicPde   CellVecData   
  G  
PCLDUFactorisation   VolumeConstraintPottsUpdateRule   
AbstractLinearParabolicPdeSystemForCoupledOdeSystem   CellVolumesWriter   PCLDUFactorisation::PCLDUFactorisationContext   VolumeDependentAveragedSourcePde   
AbstractLinearPdeSolver   CellwiseDataGradient   GammaDistributedStochasticDurationCellCycleModel   PCTwoLevelsBlockDiagonal   VolumeTrackingModifier   
AbstractLookupTableCollection   CellwiseOdeSystemInformation   GaussianQuadratureRule   PCTwoLevelsBlockDiagonal::PCTwoLevelsBlockDiagonalContext   VoronoiDataWriter   
AbstractMaterialLaw   CellwiseSourcePde   GeneralisedLinearSpringForce   PdeAndBoundaryConditions   VoronoiVertexMeshGenerator   
AbstractMesh   ChasteBuildInfo   GeneralPlaneStimulusCellFactory   PdeConvergenceTester   VtkMeshReader   
AbstractMeshReader   ChasteCuboid   GenericEventHandler   PdeSimulationTime   VtkMeshWriter   
AbstractMeshWriter   ChasteEllipsoid   GmshMeshReader   PetscMatTools   VtkNonlinearElasticitySolutionWriter   
AbstractModifier   ChasteNodesList   GmshTypes   PetscSetup   
  W  
AbstractNonlinearAssemblerSolverHybrid   ChastePoint   Goldbeter1991OdeSystem   PetscSetupUtils   
AbstractNonlinearElasticitySolver   ChastePoint< 0 >   Goldbeter1991SrnModel   PetscTools   Warnings   
AbstractNonlinearEllipticPde   ChastePosixPathFixer   GRL1IvpOdeSolver   PetscVecTools   WelikyOsterForce   
AbstractNonlinearSolver   ChemotacticForce   GRL2IvpOdeSolver   PlaneBasedCellKiller   WildTypeCellMutationState   
AbstractOdeBasedCellCycleModel   ChemotaxisPottsUpdateRule   
  H  
PlaneBoundaryCondition   WntCellCycleModel   
AbstractOdeBasedContractionModel   Citations   PlaneStimulusCellFactory   WntCellCycleOdeSystem   
AbstractOdeSrnModel   CmguiDeformedSolutionsWriter   Hdf5DataReader   PoleZeroMaterialLaw   WntConcentration   
AbstractOdeSystem   CmguiMeshWriter   Hdf5DataWriter   PolynomialMaterialLaw3d   
  X  
AbstractOdeSystemForCoupledPdeSystem   CML_noble_varghese_kohl_noble_1998_basic_with_sac   Hdf5ToCmguiConverter   PostProcessingWriter   
AbstractOdeSystemInformation   ColumnDataReader   Hdf5ToMeshalyzerConverter   PottsBasedCellPopulation   XdmfMeshWriter   
AbstractOdeSystemWithAnalyticJacobian   ColumnDataWriter   Hdf5ToTxtConverter   PottsElement   XmlTools   
AbstractOffLatticeCellPopulation   CombinedOdeSystem   Hdf5ToVtkConverter   PottsElementData   XmlTransforms   
AbstractOneStepIvpOdeSolver   CombinedOdeSystemInformation   Hdf5ToXdmfConverter   PottsMesh   
  Z  
AbstractOnLatticeCellPopulation   CommandLineArguments   HeartConfig   PottsMesh::PottsElementIterator   
AbstractOutputModifier   CommandLineArgumentsMocker   HeartConfigRelatedCellFactory   PottsMeshGenerator   ZeroNetChargeElectrodes   
AbstractParameterisedSystem   CompareDoubles   HeartEventHandler   PottsMeshReader   ZeroStimulus   
AbstractPerElementWriter   CompressibleExponentialLaw   HeartFileFinder   PottsMeshWriter   ZeroStimulusCellFactory   
AbstractPottsUpdateRule   CompressibleMooneyRivlinMaterialLaw   HeartGeometryInformation   ProcessSpecificArchive   
  b  
AbstractPurkinjeCellFactory   CompressibleNonlinearElasticitySolver   HeartRegionCode   ProgressReporter   
AbstractRushLarsenCardiacCell   ConstantActiveTension   HeterotypicBoundaryLengthWriter   PropagationPropertiesCalculator   badsubseg   
AbstractSimpleCellCycleModel   ConstBoundaryCondition   HeunIvpOdeSolver   PseudoEcgCalculator   badtriang   
AbstractSimpleGenerationBasedCellCycleModel   ContactInhibitionCellCycleModel   HoneycombMeshGenerator   PurkinjeVentricularJunctionStimulus   behavior   
AbstractSrnModel   ContinuumMechanicsNeumannBcsAssembler   HoneycombVertexMeshGenerator   
  Q  
  e  
AbstractStaticLinearPdeSolver   ContinuumMechanicsProblemDefinition   
  I  
AbstractSteadyStateRunner   ContractionModelInputParameters_   QuadraticBasisFunction   event   
AbstractStimulusFactory   CorriasBuistICCModified   AbstractCellPopulation::Iterator   QuadraticBasisFunction< 0 >   
  f  
AbstractStimulusFunction   CorriasBuistSMCModified   CombinedOdeSystemInformation::InstancePointers   QuadraticMesh   
AbstractTargetAreaModifier   CreateElectricsProblem   DistributedVector::Iterator   QuadraticMeshHelper   flipstacker   
AbstractTetrahedralElement   CreateElectricsProblem< DIM, 1u >   Identifiable   QuadraturePointsGroup   
  m  
AbstractTetrahedralElement< 0, SPACE_DIM >   CreateElectricsProblem< DIM, 2u >   ImplicitCardiacMechanicsSolver   
  R  
AbstractTetrahedralMesh   CryptCellsGenerator   IncompressibleNonlinearElasticitySolver   memorypool   
AbstractTetrahedralMeshWriter   CryptProjectionForce   IsolatedLabelledCellKiller   RadialSloughingCellKiller   mesh   
AbstractTimeAdaptivityController   CryptProjectionStatistics   
  K  
RampedQuarterStimulusCellFactory   
  n  
AbstractTwoBodyInteractionForce   CryptSimulation1d   RandomCaSwitchingUpdateRule   
AbstractUntemplatedCardiacProblem   CryptSimulation2d   Kerchoffs2003ContractionModel   RandomCellKiller   normal_table (boost::random::detail)   
AbstractUntemplatedConvergenceTester   CryptSimulationBoundaryCondition   
  L  
RandomDirectionVertexBasedDivisionRule   normal_distribution_v156 (boost::random)   
AbstractUntemplatedParameterisedSystem   CryptStatistics   RandomNumberGenerator   null_deleter   
AbstractVanLeeuwen2009WntSwatCellCycleModel   CuboidMeshConstructor   LabelBasedContractionCellFactory   RegularStimulus   
  o  
AbstractVertexBasedDivisionRule   CvodeAdaptor   LessThanNode   RegularStimulusZeroNetCharge   
AbstractWntOdeBasedCellCycleModel   CvodeData_   LinearBasisFunction   RelativeTo   osub   
ActivationOutputModifier   Cylindrical2dMesh   LinearBasisFunction< 0 >   ReplicatableVector   otri   
AdhesionPottsUpdateRule   Cylindrical2dNodesOnlyMesh   LinearParabolicPdeSystemWithCoupledOdeSystemSolver   RepulsionForce   
  p  
Alarcon2004OxygenBasedCellCycleModel   Cylindrical2dVertexMesh   LinearSpringWithVariableSpringConstantsForce   RungeKutta2IvpOdeSolver   
Alarcon2004OxygenBasedCellCycleOdeSystem   CylindricalHoneycombMeshGenerator   LinearSystem   RungeKutta4IvpOdeSolver   normal_distribution_v156::param_type (boost::random)   
ApcOneHitCellMutationState   CylindricalHoneycombVertexMeshGenerator   LogFile   RungeKuttaFehlbergIvpOdeSolver   pack   
ApcTwoHitCellMutationState   DistributedVector::Chunk   LuoRudySpiralWaveCellFactory   
  S  
pack< void(T)>   
DistributedVector::Stripe   
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