#include <AbstractMeshWriter.hpp>

Inheritance diagram for AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >:

Collaboration diagram for AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >:

Public Member Functions
	AbstractMeshWriter (const std::string &rDirectory, const std::string &rBaseName, const bool clearOutputDir=true)

virtual	~AbstractMeshWriter ()

std::string	GetOutputDirectory ()

virtual unsigned	GetNumNodes ()

unsigned	GetNumElements ()

unsigned	GetNumBoundaryFaces ()

unsigned	GetNumCableElements ()

virtual std::vector< double >	GetNextNode ()

virtual ElementData	GetNextElement ()

virtual ElementData	GetNextBoundaryElement ()

virtual ElementData	GetNextCableElement ()

virtual void	WriteFiles ()=0

void	WriteFilesUsingMeshReader (AbstractMeshReader< ELEMENT_DIM, SPACE_DIM > &rMeshReader)

Protected Attributes
OutputFileHandler *	mpOutputFileHandler

std::string	mBaseName

AbstractMeshReader < ELEMENT_DIM, SPACE_DIM > *	mpMeshReader

unsigned	mNumNodes

unsigned	mNumElements

unsigned	mNumBoundaryElements

unsigned	mNumCableElements

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >

An abstract mesh writer class.

Definition at line 50 of file AbstractMeshWriter.hpp.

Constructor & Destructor Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::AbstractMeshWriter	(	const std::string &	rDirectory,
		const std::string &	rBaseName,
		const bool	clearOutputDir = `true`
	)

Constructor.

Parameters

rDirectory	the directory in which to write the mesh to file
rBaseName	the base name of the files in which to write the mesh data
clearOutputDir	whether to clean the directory (defaults to true)

Definition at line 45 of file AbstractMeshWriter.cpp.

References AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpOutputFileHandler.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::~AbstractMeshWriter ( )

virtual

Destructor.

Definition at line 55 of file AbstractMeshWriter.cpp.

Member Function Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

ElementData AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextBoundaryElement ( )

virtual

Returns: the data (indices/attributes) of the next face to be written to file

Reimplemented in AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 106 of file AbstractMeshWriter.cpp.

Referenced by AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextBoundaryElement().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

ElementData AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextCableElement ( )

virtual

Returns: the data (indices/attributes) of the next cable element to be written to file

Reimplemented in AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 113 of file AbstractMeshWriter.cpp.

Referenced by AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextCableElement().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

ElementData AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextElement ( )

virtual

Returns: the data (indices/attributes) of the next element to be written to file

Reimplemented in AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >, VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >, and PottsMeshWriter< DIM >.

Definition at line 99 of file AbstractMeshWriter.cpp.

Referenced by PottsMeshWriter< DIM >::GetNextElement(), VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextElement(), and AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextElement().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

std::vector< double > AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextNode ( )

virtual

Returns: the coordinates of the next node to be written to file

Reimplemented in AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >, VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >, and PottsMeshWriter< DIM >.

Definition at line 92 of file AbstractMeshWriter.cpp.

Referenced by PottsMeshWriter< DIM >::GetNextNode(), VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextNode(), and AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNextNode().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNumBoundaryFaces ( )

Returns: the number of boundary elements in the mesh.

Definition at line 79 of file AbstractMeshWriter.cpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNumCableElements ( )

Returns: the number of cable elements in the mesh.

Definition at line 85 of file AbstractMeshWriter.cpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNumElements ( )

Returns: the number of elements in the mesh.

Definition at line 73 of file AbstractMeshWriter.cpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetNumNodes ( )

virtual

Returns: the number of nodes in the mesh.

Reimplemented in CmguiDeformedSolutionsWriter< DIM >.

Definition at line 67 of file AbstractMeshWriter.cpp.

Referenced by CaBasedCellPopulation< DIM >::WriteVtkResultsToFile().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

std::string AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::GetOutputDirectory ( )

Returns: the full path to the directory where meshes will be written.

Definition at line 61 of file AbstractMeshWriter.cpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

virtual void AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFiles ( )

pure virtual

Write mesh data to files. This method must be overridden in concrete classes.

Implemented in CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >, CmguiMeshWriter< DIM, DIM >, VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >, VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >, MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >, PottsMeshWriter< DIM >, XdmfMeshWriter< ELEMENT_DIM, SPACE_DIM >, and TrianglesMeshWriter< ELEMENT_DIM, SPACE_DIM >.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMeshReader ( AbstractMeshReader< ELEMENT_DIM, SPACE_DIM > & rMeshReader )

Read in a mesh and write it to file.

Parameters

rMeshReader the mesh reader

Only triangles mesh readers know about cable elements

Definition at line 121 of file AbstractMeshWriter.cpp.

References PetscTools::AmMaster(), and AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >::GetNumNodes().

Referenced by Hdf5ToCmguiConverter< ELEMENT_DIM, SPACE_DIM >::Hdf5ToCmguiConverter(), Hdf5ToMeshalyzerConverter< ELEMENT_DIM, SPACE_DIM >::Hdf5ToMeshalyzerConverter(), and Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >::Hdf5ToVtkConverter().

Member Data Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

std::string AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::mBaseName

protected

Base name for the input files

Definition at line 55 of file AbstractMeshWriter.hpp.

Referenced by CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >::CmguiMeshWriter().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::mNumBoundaryElements

protected

Total number of boundary elements in mesh/mesh-reader

Definition at line 61 of file AbstractMeshWriter.hpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::mNumCableElements

protected

Total number of cable elements in mesh/mesh-reader

Definition at line 62 of file AbstractMeshWriter.hpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::mNumElements

protected

Total number of elements in mesh/mesh-reader

Definition at line 60 of file AbstractMeshWriter.hpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

unsigned AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::mNumNodes

protected

Total number of nodes in mesh/mesh-reader

Definition at line 59 of file AbstractMeshWriter.hpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

AbstractMeshReader<ELEMENT_DIM,SPACE_DIM>* AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpMeshReader

protected

Writer by default writes from a reader (for conversion). If this pointer is non-null, data can be copied straight across

Definition at line 57 of file AbstractMeshWriter.hpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

OutputFileHandler* AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::mpOutputFileHandler

protected

Output file handler

Definition at line 54 of file AbstractMeshWriter.hpp.

Referenced by AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::AbstractMeshWriter().

The documentation for this class was generated from the following files:

mesh/src/writer/AbstractMeshWriter.hpp
mesh/src/writer/AbstractMeshWriter.cpp

Public Member Functions

Protected Attributes

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM> class AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >