Chaste  Release::3.4
AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > Member List

This is the complete list of members for AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >, including all inherited members.

AbstractCellPopulation(AbstractMesh< ELEMENT_DIM, SPACE_DIM > &rMesh)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
AbstractCellPopulation(AbstractMesh< ELEMENT_DIM, SPACE_DIM > &rMesh, std::vector< CellPtr > &rCells, const std::vector< unsigned > locationIndices=std::vector< unsigned >())AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
AcceptCellWriter(boost::shared_ptr< AbstractCellWriter< ELEMENT_DIM, SPACE_DIM > > pCellWriter, CellPtr pCell)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
AcceptCellWritersAcrossPopulation()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protectedvirtual
AcceptPopulationCountWriter(boost::shared_ptr< AbstractCellPopulationCountWriter< ELEMENT_DIM, SPACE_DIM > > pPopulationCountWriter)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
AcceptPopulationWriter(boost::shared_ptr< AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM > > pPopulationWriter)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
AddCell(CellPtr pNewCell, const c_vector< double, SPACE_DIM > &rCellDivisionVector, CellPtr pParentCell=CellPtr())=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
AddCellPopulationCountWriter()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >inline
AddCellPopulationCountWriter(boost::shared_ptr< AbstractCellPopulationCountWriter< ELEMENT_DIM, SPACE_DIM > > pCellPopulationCountWriter)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >inline
AddCellUsingLocationIndex(unsigned index, CellPtr pCell)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >virtual
AddCellWriter()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >inline
AddCellWriter(boost::shared_ptr< AbstractCellWriter< ELEMENT_DIM, SPACE_DIM > > pCellWriter)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >inline
AddPopulationWriter()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >inline
AddPopulationWriter(boost::shared_ptr< AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM > > pPopulationWriter)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >inline
Begin()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
boost::serialization::access classAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >friend
CloseRoundRobinWritersFiles()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >private
CloseWritersFiles()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
CreateOrderedPair(unsigned index1, unsigned index2)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
End()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetCellAncestors()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetCellCyclePhaseCount()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetCellMutationStateCount()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetCellProliferativeTypeCount()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetCellPropertyRegistry()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetCellsUsingLocationIndex(unsigned index)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetCellUsingLocationIndex(unsigned index)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >virtual
GetCentroidOfCellPopulation()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetIdentifier() const Identifiable
GetLocationIndexUsingCell(CellPtr pCell)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetLocationOfCellCentre(CellPtr pCell)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
GetNeighbouringLocationIndices(CellPtr pCell)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
GetNeighbouringNodeIndices(unsigned index)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
GetNode(unsigned index)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
GetNumAllCells()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetNumNodes()=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
GetNumRealCells()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetOutputResultsForChasteVisualizer()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetSizeOfCellPopulation()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
GetVolumeOfCell(CellPtr pCell)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
GetWidth(const unsigned &rDimension)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
HasWriter() const AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >inline
InitialiseCells()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
IsCellAssociatedWithADeletedLocation(CellPtr pCell)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
IsCellAttachedToLocationIndex(unsigned index)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
IsRoomToDivide(CellPtr pCell)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >virtual
mCellLocationMapAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
mCellPopulationCountWritersAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
mCellPopulationWritersAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
mCellsAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
mCellWritersAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
mCentroidAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
mLocationCellMapAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
mOutputResultsForChasteVisualizerAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
MoveCellInLocationMap(CellPtr pCell, unsigned old_index, unsigned new_index)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
mpCellPropertyRegistryAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
mpVtkMetaFileAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
mrMeshAbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protected
OpenRoundRobinWritersFilesForAppend(OutputFileHandler &rOutputFileHandler)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >private
OpenWritersFiles(OutputFileHandler &rOutputFileHandler)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >virtual
OutputCellPopulationInfo(out_stream &rParamsFile)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
OutputCellPopulationParameters(out_stream &rParamsFile)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
RemoveCellUsingLocationIndex(unsigned index, CellPtr pCell)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >virtual
RemoveDeadCells()=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
rGetCells()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
rGetMesh()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
serialize(Archive &archive, const unsigned int version)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >inlineprivate
SetCellAncestorsToLocationIndices()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
SetCellUsingLocationIndex(unsigned index, CellPtr pCell)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
SetDataOnAllCells(const std::string &rDataName, double dataValue)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
SetDefaultCellMutationStateAndProliferativeTypeOrdering()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
SetNode(unsigned nodeIndex, ChastePoint< SPACE_DIM > &rNewLocation)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
SetOutputResultsForChasteVisualizer(bool outputResultsForChasteVisualizer)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >
Update(bool hasHadBirthsOrDeaths=true)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >pure virtual
UpdateCellProcessLocation()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >virtual
Validate()=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protectedpure virtual
WriteResultsToFiles(const std::string &rDirectory)AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >virtual
WriteVtkResultsToFile(const std::string &rDirectory)=0AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >protectedpure virtual
~AbstractCellPopulation()AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >virtual
~Identifiable()Identifiablevirtual