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AbstractOdeSrnModel Member List
This is the complete list of members for
AbstractOdeSrnModel
, including all inherited members.
AbstractOdeSrnModel
(unsigned stateSize, boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())
AbstractOdeSrnModel
AbstractSrnModel
()
AbstractSrnModel
AdjustOdeParameters
(double currentTime)
CellCycleModelOdeHandler
protected
virtual
boost::serialization::access
class
AbstractOdeSrnModel
friend
CellCycleModelOdeHandler
(double lastTime=SimulationTime::Instance() ->GetTime(), boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())
CellCycleModelOdeHandler
CreateSrnModel
(AbstractOdeSrnModel *pModel)
AbstractOdeSrnModel
protected
AbstractSrnModel::CreateSrnModel
()=0
AbstractSrnModel
pure virtual
GetCell
()
AbstractSrnModel
GetDt
()
CellCycleModelOdeHandler
GetIdentifier
() const
Identifiable
GetOdeSolver
() const
CellCycleModelOdeHandler
GetOdeSystem
() const
CellCycleModelOdeHandler
GetSimulatedToTime
()
AbstractSrnModel
GetStateVariables
()
AbstractOdeSrnModel
Initialise
(AbstractOdeSystem *pOdeSystem)
AbstractOdeSrnModel
protected
AbstractSrnModel::Initialise
()
AbstractSrnModel
virtual
InitialiseDaughterCell
()
AbstractSrnModel
virtual
mDt
CellCycleModelOdeHandler
protected
mFinishedRunningOdes
AbstractOdeSrnModel
protected
mInitialConditions
AbstractOdeSrnModel
protected
mLastTime
CellCycleModelOdeHandler
protected
mpCell
AbstractSrnModel
protected
mpOdeSolver
CellCycleModelOdeHandler
protected
mpOdeSystem
CellCycleModelOdeHandler
protected
mSimulatedToTime
AbstractSrnModel
protected
mStateSize
AbstractOdeSrnModel
protected
OutputSrnModelInfo
(out_stream &rParamsFile)
AbstractSrnModel
OutputSrnModelParameters
(out_stream &rParamsFile)
AbstractOdeSrnModel
virtual
ResetForDivision
()
AbstractOdeSrnModel
virtual
serialize
(Archive &archive, const unsigned int version)
AbstractOdeSrnModel
inline
private
SetCell
(CellPtr pCell)
AbstractSrnModel
SetDt
(double timeStep)
CellCycleModelOdeHandler
SetFinishedRunningOdes
(bool finishedRunningOdes)
AbstractOdeSrnModel
SetInitialConditions
(std::vector< double > initialConditions)
AbstractOdeSrnModel
SetLastTime
(double lastTime)
CellCycleModelOdeHandler
SetOdeSystem
(AbstractOdeSystem *pOdeSystem)
CellCycleModelOdeHandler
SetSimulatedToTime
(double simulatedToTime)
AbstractSrnModel
SetStateVariables
(const std::vector< double > &rStateVariables)
CellCycleModelOdeHandler
SimulateToCurrentTime
()
AbstractOdeSrnModel
virtual
SolveOdeToTime
(double currentTime)
CellCycleModelOdeHandler
protected
~AbstractOdeSrnModel
()
AbstractOdeSrnModel
virtual
~AbstractSrnModel
()
AbstractSrnModel
virtual
~CellCycleModelOdeHandler
()
CellCycleModelOdeHandler
virtual
~Identifiable
()
Identifiable
virtual
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