AbstractCardiacTissue(AbstractCardiacCellFactory< ELEMENT_DIM, ELEMENT_DIM > *pCellFactory, bool exchangeHalos=false) | AbstractCardiacTissue< SPACE_DIM > | |
AbstractCardiacTissue(AbstractTetrahedralMesh< ELEMENT_DIM, ELEMENT_DIM > *pMesh) | AbstractCardiacTissue< SPACE_DIM > | |
BidomainTissue(AbstractCardiacCellFactory< SPACE_DIM > *pCellFactory, bool exchangeHalos=false) | BidomainTissue< SPACE_DIM > | |
BidomainTissue(AbstractTetrahedralMesh< SPACE_DIM, SPACE_DIM > *pMesh) | BidomainTissue< SPACE_DIM > | |
boost::serialization::access class | BidomainTissue< SPACE_DIM > | friend |
CalculateHaloNodesFromNodeExchange() | AbstractCardiacTissue< SPACE_DIM > | protected |
CreateExtracellularConductivityTensors() | BidomainTissue< SPACE_DIM > | private |
GetCardiacCell(unsigned globalIndex) | AbstractCardiacTissue< SPACE_DIM > | |
GetCardiacCellOrHaloCell(unsigned globalIndex) | AbstractCardiacTissue< SPACE_DIM > | |
GetDoCacheReplication() | AbstractCardiacTissue< SPACE_DIM > | |
GetPurkinjeCell(unsigned globalIndex) | AbstractCardiacTissue< SPACE_DIM > | |
HasPurkinje() | AbstractCardiacTissue< SPACE_DIM > | |
LoadCardiacCells(Archive &archive, const unsigned int version) | AbstractCardiacTissue< SPACE_DIM > | inline |
mCellsDistributed | AbstractCardiacTissue< SPACE_DIM > | protected |
mDoCacheReplication | AbstractCardiacTissue< SPACE_DIM > | protected |
mExchangeHalos | AbstractCardiacTissue< SPACE_DIM > | protected |
mFibreFilePathNoExtension | AbstractCardiacTissue< SPACE_DIM > | protected |
mHaloCellsDistributed | AbstractCardiacTissue< SPACE_DIM > | protected |
mHaloGlobalToLocalIndexMap | AbstractCardiacTissue< SPACE_DIM > | protected |
mHaloNodes | AbstractCardiacTissue< SPACE_DIM > | protected |
mHasPurkinje | AbstractCardiacTissue< SPACE_DIM > | protected |
mIionicCacheReplicated | AbstractCardiacTissue< SPACE_DIM > | protected |
mIntracellularStimulusCacheReplicated | AbstractCardiacTissue< SPACE_DIM > | protected |
mMeshUnarchived | AbstractCardiacTissue< SPACE_DIM > | protected |
mNodesToReceivePerProcess | AbstractCardiacTissue< SPACE_DIM > | protected |
mNodesToSendPerProcess | AbstractCardiacTissue< SPACE_DIM > | protected |
mpConductivityModifier | AbstractCardiacTissue< SPACE_DIM > | protected |
mpConfig | AbstractCardiacTissue< SPACE_DIM > | protected |
mpDistributedVectorFactory | AbstractCardiacTissue< SPACE_DIM > | protected |
mpExtracellularConductivityTensors | BidomainTissue< SPACE_DIM > | private |
mpIntracellularConductivityTensors | AbstractCardiacTissue< SPACE_DIM > | protected |
mpMesh | AbstractCardiacTissue< SPACE_DIM > | protected |
mPurkinjeCellsDistributed | AbstractCardiacTissue< SPACE_DIM > | protected |
mPurkinjeIionicCacheReplicated | AbstractCardiacTissue< SPACE_DIM > | protected |
mPurkinjeIntracellularStimulusCacheReplicated | AbstractCardiacTissue< SPACE_DIM > | protected |
pGetMesh() const | AbstractCardiacTissue< SPACE_DIM > | |
ReplicateCaches() | AbstractCardiacTissue< SPACE_DIM > | |
rGetCellsDistributed() const | AbstractCardiacTissue< SPACE_DIM > | |
rGetExtracellularConductivityTensor(unsigned elementIndex) | BidomainTissue< SPACE_DIM > | virtual |
rGetIionicCacheReplicated() | AbstractCardiacTissue< SPACE_DIM > | |
rGetIntracellularConductivityTensor(unsigned elementIndex) | AbstractCardiacTissue< SPACE_DIM > | |
rGetIntracellularStimulusCacheReplicated() | AbstractCardiacTissue< SPACE_DIM > | |
rGetPurkinjeCellsDistributed() const | AbstractCardiacTissue< SPACE_DIM > | |
rGetPurkinjeIionicCacheReplicated() | AbstractCardiacTissue< SPACE_DIM > | |
rGetPurkinjeIntracellularStimulusCacheReplicated() | AbstractCardiacTissue< SPACE_DIM > | |
SaveCardiacCells(Archive &archive, const unsigned int version) const | AbstractCardiacTissue< SPACE_DIM > | inline |
serialize(Archive &archive, const unsigned int version) | BidomainTissue< SPACE_DIM > | inlineprivate |
SetCacheReplication(bool doCacheReplication) | AbstractCardiacTissue< SPACE_DIM > | |
SetConductivityModifier(AbstractConductivityModifier< ELEMENT_DIM, ELEMENT_DIM > *pModifier) | AbstractCardiacTissue< SPACE_DIM > | |
SetUpHaloCells(AbstractCardiacCellFactory< ELEMENT_DIM, ELEMENT_DIM > *pCellFactory) | AbstractCardiacTissue< SPACE_DIM > | protected |
SolveCellSystems(Vec existingSolution, double time, double nextTime, bool updateVoltage=false) | AbstractCardiacTissue< SPACE_DIM > | virtual |
TestBidomainTissue (defined in BidomainTissue< SPACE_DIM >) | BidomainTissue< SPACE_DIM > | friend |
UpdateCaches(unsigned globalIndex, unsigned localIndex, double nextTime) | AbstractCardiacTissue< SPACE_DIM > | |
UpdatePurkinjeCaches(unsigned globalIndex, unsigned localIndex, double nextTime) | AbstractCardiacTissue< SPACE_DIM > | |
~AbstractCardiacTissue() | AbstractCardiacTissue< SPACE_DIM > | virtual |
~BidomainTissue() | BidomainTissue< SPACE_DIM > | |