AddPdeAndBc(PdeAndBoundaryConditions< DIM > *pPdeAndBc) | CellBasedPdeHandler< DIM > | |
boost::serialization::access class | CellBasedPdeHandler< DIM > | friend |
CellBasedPdeHandler(AbstractCellPopulation< DIM > *pCellPopulation, bool deleteMemberPointersInDestructor=false) | CellBasedPdeHandler< DIM > | |
CloseResultsFiles() | CellBasedPdeHandler< DIM > | |
ConstructBoundaryConditionsContainer(PdeAndBoundaryConditions< DIM > *pPdeAndBc, TetrahedralMesh< DIM, DIM > *pMesh) | CellBasedPdeHandler< DIM > | virtual |
FindCoarseElementContainingCell(CellPtr pCell) | CellBasedPdeHandler< DIM > | |
GetCellPopulation() const | CellBasedPdeHandler< DIM > | |
GetCoarsePdeMesh() | CellBasedPdeHandler< DIM > | |
GetIdentifier() const | Identifiable | |
GetImposeBcsOnCoarseBoundary() | CellBasedPdeHandler< DIM > | |
GetNumRadialIntervals() | CellBasedPdeHandler< DIM > | |
GetPdeSolution(const std::string &rName="") | CellBasedPdeHandler< DIM > | virtual |
GetPdeSolutionAtPoint(const c_vector< double, DIM > &rPoint, const std::string &rVariable) | CellBasedPdeHandler< DIM > | |
GetWriteAverageRadialPdeSolution() | CellBasedPdeHandler< DIM > | |
GetWriteDailyAverageRadialPdeSolution() | CellBasedPdeHandler< DIM > | |
InitialiseCellPdeElementMap() | CellBasedPdeHandler< DIM > | protected |
mAverageRadialSolutionVariableName | CellBasedPdeHandler< DIM > | protected |
mCellPdeElementMap | CellBasedPdeHandler< DIM > | protected |
mDeleteMemberPointersInDestructor | CellBasedPdeHandler< DIM > | protected |
mDirPath | CellBasedPdeHandler< DIM > | protected |
mNumRadialIntervals | CellBasedPdeHandler< DIM > | protected |
mpAverageRadialPdeSolutionResultsFile | CellBasedPdeHandler< DIM > | protected |
mpCellPopulation | CellBasedPdeHandler< DIM > | protected |
mpCoarsePdeMesh | CellBasedPdeHandler< DIM > | protected |
mPdeAndBcCollection | CellBasedPdeHandler< DIM > | protected |
mpVizPdeSolutionResultsFile | CellBasedPdeHandler< DIM > | protected |
mSetBcsOnCoarseBoundary | CellBasedPdeHandler< DIM > | protected |
mWriteAverageRadialPdeSolution | CellBasedPdeHandler< DIM > | protected |
mWriteDailyAverageRadialPdeSolution | CellBasedPdeHandler< DIM > | protected |
OpenResultsFiles(std::string outputDirectory) | CellBasedPdeHandler< DIM > | |
OutputParameters(out_stream &rParamsFile) | CellBasedPdeHandler< DIM > | virtual |
PdeSolveNeedsCoarseMesh() | CellBasedPdeHandler< DIM > | protected |
serialize(Archive &archive, const unsigned int version) | CellBasedPdeHandler< DIM > | inlineprivate |
SetImposeBcsOnCoarseBoundary(bool setBcsOnCoarseBoundary) | CellBasedPdeHandler< DIM > | |
SetWriteAverageRadialPdeSolution(const std::string &rName, unsigned numRadialIntervals=10, bool writeDailyResults=false) | CellBasedPdeHandler< DIM > | |
SolvePdeAndWriteResultsToFile(unsigned samplingTimestepMultiple) | CellBasedPdeHandler< DIM > | virtual |
TestCellBasedPdeHandler (defined in CellBasedPdeHandler< DIM >) | CellBasedPdeHandler< DIM > | friend |
TestOffLatticeSimulationWithPdes (defined in CellBasedPdeHandler< DIM >) | CellBasedPdeHandler< DIM > | friend |
TestOnLatticeSimulationWithPdes (defined in CellBasedPdeHandler< DIM >) | CellBasedPdeHandler< DIM > | friend |
UpdateCellPdeElementMap() | CellBasedPdeHandler< DIM > | |
UseCoarsePdeMesh(double stepSize, ChasteCuboid< DIM > meshCuboid, bool centreOnCellPopulation=false) | CellBasedPdeHandler< DIM > | virtual |
WriteAverageRadialPdeSolution(double time) | CellBasedPdeHandler< DIM > | protected |
WritePdeSolution(double time) | CellBasedPdeHandler< DIM > | protectedvirtual |
~CellBasedPdeHandler() | CellBasedPdeHandler< DIM > | virtual |
~Identifiable() | Identifiable | virtual |