Chaste  Release::3.4
Cylindrical2dNodesOnlyMesh Member List

This is the complete list of members for Cylindrical2dNodesOnlyMesh, including all inherited members.

AbstractMesh()AbstractMesh< ELEMENT_DIM, SPACE_DIM >
AbstractTetrahedralMesh()AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
AddElement(Element< ELEMENT_DIM, SPACE_DIM > *pNewElement)MutableMesh< SPACE_DIM, SPACE_DIM >
AddHaloNode(boost::shared_ptr< Node< SPACE_DIM > > pNewNode)NodesOnlyMesh< 2 >
AddHaloNodesToBoxes()NodesOnlyMesh< 2 >
AddMovedNode(boost::shared_ptr< Node< SPACE_DIM > > pMovedNode)NodesOnlyMesh< 2 >
AddNode(Node< 2 > *pNewNode)Cylindrical2dNodesOnlyMesh
NodesOnlyMesh< 2 >::AddNode(Node< SPACE_DIM > *pNewNode)NodesOnlyMesh< 2 >virtual
AddNodesToBoxes()NodesOnlyMesh< 2 >
boost::serialization::access classCylindrical2dNodesOnlyMeshfriend
BoundaryElementIterator typedefAbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
BoundaryNodeIterator typedefAbstractMesh< ELEMENT_DIM, SPACE_DIM >
CalculateBoundaryNodePairs(std::vector< std::pair< Node< SPACE_DIM > *, Node< SPACE_DIM > * > > &rNodePairs, std::map< unsigned, std::set< unsigned > > &rNodeNeighbours)NodesOnlyMesh< 2 >
CalculateBoundingBox(const std::vector< Node< SPACE_DIM > * > &rNodes) const AbstractMesh< ELEMENT_DIM, SPACE_DIM >protected
CalculateBoundingBox() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >virtual
CalculateDesignatedOwnershipOfBoundaryElement(unsigned faceIndex)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
CalculateDesignatedOwnershipOfElement(unsigned elementIndex)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
CalculateInteriorNodePairs(std::vector< std::pair< Node< SPACE_DIM > *, Node< SPACE_DIM > * > > &rNodePairs, std::map< unsigned, std::set< unsigned > > &rNodeNeighbours)NodesOnlyMesh< 2 >
CalculateMaximumContainingElementsPerProcess() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
CalculateMaximumNodeConnectivityPerProcess() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
CalculateMinMaxEdgeLengths()AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
CalculateNodeExchange(std::vector< std::vector< unsigned > > &rNodesToSendPerProcess, std::vector< std::vector< unsigned > > &rNodesToReceivePerProcess)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
CalculateNodesOutsideLocalDomain()NodesOnlyMesh< 2 >
CheckIsConforming()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
CheckIsVoronoi(double maxPenetration=0.0)MutableMesh< SPACE_DIM, SPACE_DIM >
CheckOutwardNormals()AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
Clear()NodesOnlyMesh< 2 >virtual
ClearBoxCollection()NodesOnlyMesh< 2 >protected
ClearHaloNodes()NodesOnlyMesh< 2 >
ConstructCuboid(unsigned width, unsigned height, unsigned depth)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
ConstructFromMesh(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > &rOtherMesh)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
ConstructFromMeshReader(AbstractMeshReader< SPACE_DIM, SPACE_DIM > &rMeshReader)NodesOnlyMesh< 2 >
MutableMesh< SPACE_DIM, SPACE_DIM >::ConstructFromMeshReader(AbstractMeshReader< ELEMENT_DIM, SPACE_DIM > &rMeshReader)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
ConstructLinearMesh(unsigned width)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
ConstructNodesWithoutMesh(const std::vector< Node< SPACE_DIM > * > &rNodes, double maxInteractionDistance)NodesOnlyMesh< 2 >
ConstructNodesWithoutMesh(const AbstractMesh< SPACE_DIM, SPACE_DIM > &rGeneratingMesh, double maxInteractionDistance)NodesOnlyMesh< 2 >
ConstructRectangularMesh(unsigned width, unsigned height, bool stagger=true)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
ConstructRegularSlabMesh(double spaceStep, double width, double height=0, double depth=0)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
ConstructRegularSlabMeshWithDimensionSplit(unsigned dimension, double spaceStep, double width, double height=0, double depth=0)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
Cylindrical2dNodesOnlyMesh(double width)Cylindrical2dNodesOnlyMesh
DeleteBoundaryNodeAt(unsigned index)MutableMesh< SPACE_DIM, SPACE_DIM >
DeleteElement(unsigned index)MutableMesh< SPACE_DIM, SPACE_DIM >virtual
DeleteMovedNode(unsigned index)NodesOnlyMesh< 2 >
DeleteNode(unsigned index)NodesOnlyMesh< 2 >virtual
DeleteNodePriorToReMesh(unsigned index)MutableMesh< SPACE_DIM, SPACE_DIM >
EdgesBegin()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
EdgesEnd()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
ExportToMesher(NodeMap &map, MESHER_IO &mesherInput, int *elementList=NULL)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
FreeTriangulateIo(triangulateio &mesherIo)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
GetAngleBetweenNodes(unsigned indexA, unsigned indexB)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetBoundaryElement(unsigned index) const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetBoundaryElementIteratorBegin() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetBoundaryElementIteratorEnd() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetBoundaryNodeIteratorBegin() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
GetBoundaryNodeIteratorEnd() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
GetBoxCollection()NodesOnlyMesh< 2 >protected
GetContainingElementIndex(const ChastePoint< SPACE_DIM > &rTestPoint, bool strict=false, std::set< unsigned > testElements=std::set< unsigned >(), bool onlyTryWithTestElements=false)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetContainingElementIndexWithInitialGuess(const ChastePoint< SPACE_DIM > &rTestPoint, unsigned startingElementGuess, bool strict=false)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetContainingElementIndices(const ChastePoint< SPACE_DIM > &rTestPoint)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetDistanceBetweenNodes(unsigned indexA, unsigned indexB)AbstractMesh< ELEMENT_DIM, SPACE_DIM >
GetDistributedVectorFactory()AbstractMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetElement(unsigned index) const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetElementIteratorBegin(bool skipDeletedElements=true)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >inline
GetElementIteratorEnd()AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >inline
GetHaloNodeIndices(std::vector< unsigned > &rHaloIndices) const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetInverseJacobianForElement(unsigned elementIndex, c_matrix< double, SPACE_DIM, ELEMENT_DIM > &rJacobian, double &rJacobianDeterminant, c_matrix< double, ELEMENT_DIM, SPACE_DIM > &rInverseJacobian) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetJacobianForElement(unsigned elementIndex, c_matrix< double, SPACE_DIM, SPACE_DIM > &rJacobian, double &rJacobianDeterminant) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetMaximumInteractionDistance()NodesOnlyMesh< 2 >
GetMaximumNodeIndex()NodesOnlyMesh< 2 >virtual
GetMeshFileBaseName() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
GetNearestElementIndex(const ChastePoint< SPACE_DIM > &rTestPoint)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetNearestElementIndexFromTestElements(const ChastePoint< SPACE_DIM > &rTestPoint, std::set< unsigned > testElements)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetNearestNodeIndex(const ChastePoint< SPACE_DIM > &rTestPoint)AbstractMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetNode(unsigned index) const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
GetNodeFromPrePermutationIndex(unsigned index) const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
GetNodeIteratorBegin(bool skipDeletedNodes=true)AbstractMesh< ELEMENT_DIM, SPACE_DIM >inline
GetNodeIteratorEnd()AbstractMesh< ELEMENT_DIM, SPACE_DIM >inline
GetNodeOrHaloNode(unsigned index) constNodesOnlyMesh< 2 >virtual
GetNumAllBoundaryElements() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetNumAllElements() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetNumAllNodes() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetNumBoundaryElements() constMutableMesh< SPACE_DIM, SPACE_DIM >virtual
GetNumBoundaryNodes() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
GetNumCableElements() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetNumElements() constMutableMesh< SPACE_DIM, SPACE_DIM >virtual
GetNumLocalBoundaryElements() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetNumLocalElements() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetNumNodeAttributes() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
GetNumNodes() constNodesOnlyMesh< 2 >virtual
GetNumVertices() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetSurfaceArea()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetVectorFromAtoB(const c_vector< double, 2 > &rLocation1, const c_vector< double, 2 > &rLocation2)Cylindrical2dNodesOnlyMesh
NodesOnlyMesh< 2 >::GetVectorFromAtoB(const c_vector< double, SPACE_DIM > &rLocationA, const c_vector< double, SPACE_DIM > &rLocationB)AbstractMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetVolume()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
GetWeightedDirectionForBoundaryElement(unsigned elementIndex, c_vector< double, SPACE_DIM > &rWeightedDirection, double &rJacobianDeterminant) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetWeightedDirectionForElement(unsigned elementIndex, c_vector< double, SPACE_DIM > &rWeightedDirection, double &rJacobianDeterminant) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
GetWidth(const unsigned &rDimension) const Cylindrical2dNodesOnlyMeshvirtual
ImportFromMesher(MESHER_IO &mesherOutput, unsigned numberOfElements, int *elementList, unsigned numberOfFaces, int *faceList, int *edgeMarkerList)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
InitialiseTriangulateIo(triangulateio &mesherIo)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
IsMeshChanging() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
IsMeshOnDisk() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
IsOwned(c_vector< double, SPACE_DIM > &location)NodesOnlyMesh< 2 >
LoadBalanceMesh()NodesOnlyMesh< 2 >
mAddedNodesMutableMesh< SPACE_DIM, SPACE_DIM >protected
mBoundaryElementJacobianDeterminantsTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
mBoundaryElementsAbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
mBoundaryElementWeightedDirectionsTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
mBoundaryNodesAbstractMesh< ELEMENT_DIM, SPACE_DIM >protected
mDeletedBoundaryElementIndicesMutableMesh< SPACE_DIM, SPACE_DIM >protected
mDeletedElementIndicesMutableMesh< SPACE_DIM, SPACE_DIM >protected
mDeletedNodeIndicesMutableMesh< SPACE_DIM, SPACE_DIM >protected
mElementInverseJacobiansTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
mElementJacobianDeterminantsTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
mElementJacobiansTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
mElementsAbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
mElementWeightedDirectionsTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
mMeshChangesDuringSimulationAbstractMesh< ELEMENT_DIM, SPACE_DIM >protected
mMeshFileBaseNameAbstractMesh< ELEMENT_DIM, SPACE_DIM >protected
mMeshIsLinearAbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protected
mNodePermutationAbstractMesh< ELEMENT_DIM, SPACE_DIM >protected
mNodesAbstractMesh< ELEMENT_DIM, SPACE_DIM >protected
MoveMergeNode(unsigned index, unsigned targetIndex, bool concreteMove=true)MutableMesh< SPACE_DIM, SPACE_DIM >
mpDistributedVectorFactoryAbstractMesh< ELEMENT_DIM, SPACE_DIM >protected
MutableMesh()MutableMesh< SPACE_DIM, SPACE_DIM >
MutableMesh(std::vector< Node< SPACE_DIM > * > nodes)MutableMesh< SPACE_DIM, SPACE_DIM >
mWidthCylindrical2dNodesOnlyMeshprivate
NodesOnlyMesh()NodesOnlyMesh< 2 >
PermuteNodes()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
PermuteNodes(const std::vector< unsigned > &perm)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
ReadNodesPerProcessorFile(const std::string &rNodesPerProcessorFile)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
RefineElement(Element< ELEMENT_DIM, SPACE_DIM > *pElement, ChastePoint< SPACE_DIM > point)MutableMesh< SPACE_DIM, SPACE_DIM >
RefreshJacobianCachedData()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
RefreshMesh()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
ReIndex(NodeMap &map)MutableMesh< SPACE_DIM, SPACE_DIM >
ReMesh(NodeMap &rMap)NodesOnlyMesh< 2 >virtual
MutableMesh< SPACE_DIM, SPACE_DIM >::ReMesh()MutableMesh< SPACE_DIM, SPACE_DIM >
RescaleMeshFromBoundaryNode(ChastePoint< 1 > updatedPoint, unsigned boundaryNodeIndex)MutableMesh< SPACE_DIM, SPACE_DIM >
ResizeBoxCollection()NodesOnlyMesh< 2 >
rGetHaloNodesToSendLeft()NodesOnlyMesh< 2 >
rGetHaloNodesToSendRight()NodesOnlyMesh< 2 >
rGetInitiallyOwnedNodes()NodesOnlyMesh< 2 >
rGetNodePermutation() const AbstractMesh< ELEMENT_DIM, SPACE_DIM >
rGetNodesToSendLeft()NodesOnlyMesh< 2 >
rGetNodesToSendRight()NodesOnlyMesh< 2 >
Rotate(c_matrix< double, SPACE_DIM, SPACE_DIM > rotationMatrix)AbstractMesh< ELEMENT_DIM, SPACE_DIM >virtual
Rotate(c_vector< double, 3 > axis, double angle)AbstractMesh< ELEMENT_DIM, SPACE_DIM >
Rotate(double theta)AbstractMesh< ELEMENT_DIM, SPACE_DIM >
RotateX(const double theta)AbstractMesh< ELEMENT_DIM, SPACE_DIM >
RotateY(const double theta)AbstractMesh< ELEMENT_DIM, SPACE_DIM >
RotateZ(const double theta)AbstractMesh< ELEMENT_DIM, SPACE_DIM >
Scale(const double xFactor=1.0, const double yFactor=1.0, const double zFactor=1.0)AbstractMesh< ELEMENT_DIM, SPACE_DIM >virtual
serialize(Archive &archive, const unsigned int version)Cylindrical2dNodesOnlyMeshinlineprivate
SetCalculateNodeNeighbours(bool calculateNodeNeighbours)NodesOnlyMesh< 2 >
SetDistributedVectorFactory(DistributedVectorFactory *pFactory)AbstractMesh< ELEMENT_DIM, SPACE_DIM >virtual
SetElementOwnerships()AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protectedvirtual
SetInitialBoxCollection(const c_vector< double, 2 *SPACE_DIM > domainSize, double maxInteractionDistance)NodesOnlyMesh< 2 >
SetMaximumInteractionDistance(double maxDistance)NodesOnlyMesh< 2 >
SetMeshHasChangedSinceLoading()AbstractMesh< ELEMENT_DIM, SPACE_DIM >
SetMinimumNodeDomainBoundarySeparation(double separation)NodesOnlyMesh< 2 >
SetNode(unsigned nodeIndex, ChastePoint< 2 > point, bool concreteMove=false)Cylindrical2dNodesOnlyMesh
NodesOnlyMesh< 2 >::SetNode(unsigned nodeIndex, ChastePoint< SPACE_DIM > point, bool concreteMove=false)NodesOnlyMesh< 2 >virtual
SetUpBoxCollection(double cutOffLength, c_vector< double, 2 *2 > domainSize, int numLocalRows=PETSC_DECIDE, bool isPeriodic=true)Cylindrical2dNodesOnlyMeshvirtual
NodesOnlyMesh< 2 >::SetUpBoxCollection(double cutOffLength, c_vector< double, 2 *SPACE_DIM > domainSize, int numLocalRows=PETSC_DECIDE, bool isPeriodic=false)NodesOnlyMesh< 2 >protectedvirtual
SolveBoundaryElementMapping(unsigned index) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protectedvirtual
SolveElementMapping(unsigned index) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >protectedvirtual
SolveNodeMapping(unsigned index) constNodesOnlyMesh< 2 >virtual
SplitEdge(Node< SPACE_DIM > *pNodeA, Node< SPACE_DIM > *pNodeB)MutableMesh< SPACE_DIM, SPACE_DIM >
SplitLongEdges(double cutoffLength)MutableMesh< SPACE_DIM, SPACE_DIM >
TestCylindrical2dNodesOnlyMesh (defined in Cylindrical2dNodesOnlyMesh)Cylindrical2dNodesOnlyMeshfriend
TetrahedralMesh()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
Translate(const c_vector< double, SPACE_DIM > &rDisplacement)AbstractMesh< ELEMENT_DIM, SPACE_DIM >virtual
Translate(const double xMovement=0.0, const double yMovement=0.0, const double zMovement=0.0)AbstractMesh< ELEMENT_DIM, SPACE_DIM >
UpdateBoxCollection()NodesOnlyMesh< 2 >
~AbstractMesh()AbstractMesh< ELEMENT_DIM, SPACE_DIM >virtual
~AbstractTetrahedralMesh()AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >virtual
~MutableMesh()MutableMesh< SPACE_DIM, SPACE_DIM >virtual
~NodesOnlyMesh()NodesOnlyMesh< 2 >virtual