Using the cardiac executable

This page provides examples of how to use the Chaste cardiac executable

• UserTutorials/CardiacExecutable/DownloadableSimulations -- running and visualising sample simulations available for download
• UserTutorials/CardiacExecutable/HeterogeneousExample

Examples of further functionality

• how to determine what the hardcoded cell model options are
  • dynamic loading of cellml files is possible, but requires a full developer install and the executable to be built from the source, see CodeGenerationFromCellML
• UserTutorials/CardiacExecutable/UsingFibreDefinitions -- also mentions postprocessing options
• UserTutorials/CardiacExecutable/BidomainSimulationsWithPerfusingBath
• UserTutorials/CardiacExecutable/CheckpointingAndRestarting -- how to do checkpoint and restart.
• UserTutorials/CardiacExecutable/UsingCellmlFiles -- this shows how to use cell models defined directly from a cellml file (not one of the hardcoded options), and how to output cell model variables

---

Alphabetical listing

• BidomainSimulationsWithPerfusingBath Running a bidomain simulation of cardiac tissue contained in a perfusing bath
• CheckpointingAndRestarting Checkpointing
• DownloadableSimulations Example simulations available from the Chaste website
• HardCodedCellModels Hardcoded cell model options
• HeterogeneousExample Simulations with heterogeneities
• UsingCellmlFiles UserTutorials/CardiacExecutable/UsingCellmlFiles
• UsingFibreDefinitions Using Fibre directions and postprocessing