Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
AbstractOdeBasedContractionModel.hpp
1/*
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35
36#ifndef ABSTRACTODEBASEDCONTRACTIONMODEL_
37#define ABSTRACTODEBASEDCONTRACTIONMODEL_
38
39#include "AbstractOdeSystem.hpp"
40#include "AbstractContractionModel.hpp"
41#include "AbstractIvpOdeSolver.hpp"
42#include "EulerIvpOdeSolver.hpp"
43
59{
60protected:
61
64 std::vector<double> mTemporaryStateVariables;
65
67 double mTime;
68
69public:
74 AbstractOdeBasedContractionModel(unsigned numStateVariables)
75 : AbstractOdeSystem(numStateVariables),
77 mTime(0.0)
78 {
79 // note mTemporaryStateVariables not resized here - only resized if needed
80 }
81
82
93 virtual void RunDoNotUpdate(double startTime, double endTime, double timeStep)
94 {
95 // save the state variables
96 if (mTemporaryStateVariables.size() > 0)
97 {
99 }
101
102 // solve (RunAndUpdate just calls SolveAndUpdateStateVariable() using an euler solver)
103 RunAndUpdate(startTime, endTime, timeStep);
104
105 // put the solution in mTemporaryStateVariables and return the state variables to its
106 // original state
107 for (unsigned i=0; i<mStateVariables.size(); i++)
108 {
109 double soln = mStateVariables[i];
111 mTemporaryStateVariables[i] = soln;
112 }
113
114 // note that the end time was saved in RunAndUpdate(): mTime = endTime;
115 }
116
122 {
123 // save the state variables
124 for (unsigned i=0; i<mStateVariables.size(); i++)
125 {
127 }
128 }
129
142 void RunAndUpdate(double startTime, double endTime, double timeStep)
143 {
144 EulerIvpOdeSolver solver;
145 solver.SolveAndUpdateStateVariable(this, startTime, endTime, timeStep);
146
147 mTime = endTime;
148 }
149};
150
151
152#endif /*ABSTRACTODEBASEDSTRETCHINDEPENDENTCONTRACTIONMODEL_*/
virtual void SolveAndUpdateStateVariable(AbstractOdeSystem *pAbstractOdeSystem, double startTime, double endTime, double timeStep)
virtual void RunDoNotUpdate(double startTime, double endTime, double timeStep)
AbstractOdeBasedContractionModel(unsigned numStateVariables)
void RunAndUpdate(double startTime, double endTime, double timeStep)