Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
DeltaNotchEdgeOdeSystem.hpp
1/*
2
3Copyright (c) 2005-2024, University of Oxford.
4All rights reserved.
5
6University of Oxford means the Chancellor, Masters and Scholars of the
7University of Oxford, having an administrative office at Wellington
8Square, Oxford OX1 2JD, UK.
9
10This file is part of Chaste.
11
12Redistribution and use in source and binary forms, with or without
13modification, are permitted provided that the following conditions are met:
14 * Redistributions of source code must retain the above copyright notice,
15 this list of conditions and the following disclaimer.
16 * Redistributions in binary form must reproduce the above copyright notice,
17 this list of conditions and the following disclaimer in the documentation
18 and/or other materials provided with the distribution.
19 * Neither the name of the University of Oxford nor the names of its
20 contributors may be used to endorse or promote products derived from this
21 software without specific prior written permission.
22
23THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
24AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
25IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
26ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
27LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
28CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE
29GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
30HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
31LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT
32OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
33
34*/
35
36#ifndef DELTANOTCHEDGEODESYSTEM_HPP_
37#define DELTANOTCHEDGEODESYSTEM_HPP_
38
40#include <boost/serialization/base_object.hpp>
41
42#include <cmath>
43#include <iostream>
44
45#include "AbstractOdeSystem.hpp"
46
59{
60private:
61
62 friend class boost::serialization::access;
69 template<class Archive>
70 void serialize(Archive & archive, const unsigned int version)
71 {
72 archive & boost::serialization::base_object<AbstractOdeSystem>(*this);
73 }
74public:
75
81 DeltaNotchEdgeOdeSystem(std::vector<double> stateVariables=std::vector<double>());
82
87
95 void EvaluateYDerivatives(double time, const std::vector<double>& rY, std::vector<double>& rDY);
96};
97
98// Declare identifier for the serializer
101
102namespace boost
103{
104namespace serialization
105{
109template<class Archive>
110inline void save_construct_data(
111 Archive & ar, const DeltaNotchEdgeOdeSystem * t, const unsigned int file_version)
112{
113 const std::vector<double>& state_variables = t->rGetConstStateVariables();
114 ar & state_variables;
115}
116
120template<class Archive>
121inline void load_construct_data(
122 Archive & ar, DeltaNotchEdgeOdeSystem * t, const unsigned int file_version)
123{
124 std::vector<double> state_variables;
125 ar & state_variables;
126
127 // Invoke inplace constructor to initialise instance
128 ::new(t)DeltaNotchEdgeOdeSystem(state_variables);
129}
130}
131} // namespace ...
132
133#endif /*DELTANOTCHEDGEODESYSTEM_HPP_*/
gcov doesn't like this file...
#define CHASTE_CLASS_EXPORT(T)
void EvaluateYDerivatives(double time, const std::vector< double > &rY, std::vector< double > &rDY)
void serialize(Archive &archive, const unsigned int version)