Chaste Commit::ca8ccdedf819b6e02855bc0e8e6f50bdecbc5208
RandomCellKiller.hpp
1/*
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3Copyright (c) 2005-2024, University of Oxford.
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34*/
35
36#ifndef RANDOMCELLKILLER_HPP_
37#define RANDOMCELLKILLER_HPP_
38
39#include "AbstractCellKiller.hpp"
40#include "RandomNumberGenerator.hpp"
41
43#include <boost/serialization/base_object.hpp>
44
45
62template<unsigned DIM>
64{
65private:
66
72
81 template<class Archive>
82 void serialize(Archive & archive, const unsigned int version)
83 {
84 archive & boost::serialization::base_object<AbstractCellKiller<DIM> >(*this);
85
86 // Make sure the random number generator is also archived
88 archive & p_rng_wrapper;
89 }
90
91public:
92
99 RandomCellKiller(AbstractCellPopulation<DIM>* pCellPopulation, double probabilityOfDeathInAnHour);
100
104 double GetDeathProbabilityInAnHour() const;
105
111 void CheckAndLabelSingleCellForApoptosis(CellPtr pCell);
112
118
124 void OutputCellKillerParameters(out_stream& rParamsFile);
125};
126
129
130namespace boost
131{
132namespace serialization
133{
137template<class Archive, unsigned DIM>
138inline void save_construct_data(
139 Archive & ar, const RandomCellKiller<DIM> * t, const unsigned int file_version)
140{
141 // Save data required to construct instance
142 const AbstractCellPopulation<DIM>* const p_cell_population = t->GetCellPopulation();
143 ar << p_cell_population;
144 double prob = t->GetDeathProbabilityInAnHour();
145 ar << prob;
146}
147
151template<class Archive, unsigned DIM>
152inline void load_construct_data(
153 Archive & ar, RandomCellKiller<DIM> * t, const unsigned int file_version)
154{
155 // Retrieve data from archive required to construct new instance
156 AbstractCellPopulation<DIM>* p_cell_population;
157 ar >> p_cell_population;
158 double prob;
159 ar >> prob;
160
161 // Invoke inplace constructor to initialise instance
162 ::new(t)RandomCellKiller<DIM>(p_cell_population, prob);
163}
164}
165} // namespace ...
166
167#endif /*RANDOMCELLKILLER_HPP_*/
gcov doesn't like this file...
#define EXPORT_TEMPLATE_CLASS_SAME_DIMS(CLASS)
double GetDeathProbabilityInAnHour() const
void OutputCellKillerParameters(out_stream &rParamsFile)
void CheckAndLabelCellsForApoptosisOrDeath()
void serialize(Archive &archive, const unsigned int version)
friend class boost::serialization::access
void CheckAndLabelSingleCellForApoptosis(CellPtr pCell)
static RandomNumberGenerator * Instance()
SerializableSingleton< SINGLETON_CLASS > * GetSerializationWrapper() const