ReplicatableVector.cpp

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*/
 
#include "ReplicatableVector.hpp"
#include "Exception.hpp"
#include "PetscTools.hpp"
 
#include <cassert>
#include <iostream>
 
// Private methods
 
void ReplicatableVector::RemovePetscContext()
{
    if (mToAll != nullptr)
    {
        VecScatterDestroy(PETSC_DESTROY_PARAM(mToAll));
        mToAll = nullptr;
    }
 
    if (mReplicated != nullptr)
    {
        PetscTools::Destroy(mReplicated);
        mReplicated = nullptr;
    }
 
    if (mpData != nullptr)
    {
        delete[] mpData;
        mpData = nullptr;
    }
}
 
// Constructors & destructors
 
ReplicatableVector::ReplicatableVector()
    : mpData(nullptr),
      mSize(0),
      mToAll(nullptr),
      mReplicated(nullptr)
{
}
 
ReplicatableVector::ReplicatableVector(Vec vec)
    : mpData(nullptr),
      mSize(0),
      mToAll(nullptr),
      mReplicated(nullptr)
{
    ReplicatePetscVector(vec);
}
 
ReplicatableVector::ReplicatableVector(unsigned size)
    : mpData(nullptr),
      mSize(0),
      mToAll(nullptr),
      mReplicated(nullptr)
{
    Resize(size);
}
 
ReplicatableVector::~ReplicatableVector()
{
    RemovePetscContext();
}
 
// Vector interface methods
 
unsigned ReplicatableVector::GetSize()
{
    return mSize;
}
 
void ReplicatableVector::Resize(unsigned size)
{
    // PETSc stuff will be out of date
    RemovePetscContext();
 
    mSize = size;
 
    try
    {
        mpData = new double[mSize];
    }
// LCOV_EXCL_START
    catch(std::bad_alloc &badAlloc)
    {
        std::cout << "Failed to allocate a ReplicatableVector of size " << size  << std::endl;
        PetscTools::ReplicateException(true);
        throw badAlloc;
    }
// LCOV_EXCL_STOP
 
    PetscTools::ReplicateException(false);
}
 
double& ReplicatableVector::operator[](unsigned index)
{
    assert(index < mSize);
    return mpData[index];
}
 
// The workhorse methods
 
void ReplicatableVector::Replicate(unsigned lo, unsigned hi)
{
    // Create a PetSC vector with the array containing the distributed data
    Vec distributed_vec;
 
#if (PETSC_VERSION_MAJOR == 3 && PETSC_VERSION_MINOR >= 3) //PETSc 3.3 or later
    //Extra argument is block size
    VecCreateMPIWithArray(PETSC_COMM_WORLD, 1, hi-lo, this->GetSize(), &mpData[lo], &distributed_vec);
#else
    VecCreateMPIWithArray(PETSC_COMM_WORLD, hi-lo, this->GetSize(), &mpData[lo], &distributed_vec);
#endif
#if (PETSC_VERSION_MAJOR == 3) //PETSc 3.x.x
    VecSetOption(distributed_vec, VEC_IGNORE_OFF_PROC_ENTRIES, PETSC_TRUE);
#else
    VecSetOption(distributed_vec, VEC_IGNORE_OFF_PROC_ENTRIES);
#endif
    // Now do the real replication
    ReplicatePetscVector(distributed_vec);
 
    // Clean up
    PetscTools::Destroy(distributed_vec);
}
 
void ReplicatableVector::ReplicatePetscVector(Vec vec)
{
    // If the size has changed then we'll need to make a new context
    PetscInt isize;
    VecGetSize(vec, &isize);
    unsigned size = isize;
 
    if (this->GetSize() != size)
    {
        Resize(size);
    }
    if (mReplicated == nullptr)
    {
        // This creates mToAll (the scatter context) and mReplicated (to store values)
        VecScatterCreateToAll(vec, &mToAll, &mReplicated);
    }
 
    // Replicate the data
//PETSc-3.x.x or PETSc-2.3.3
#if ((PETSC_VERSION_MAJOR == 3) || (PETSC_VERSION_MAJOR == 2 && PETSC_VERSION_MINOR == 3 && PETSC_VERSION_SUBMINOR == 3)) //2.3.3 or 3.x.x
    VecScatterBegin(mToAll, vec, mReplicated, INSERT_VALUES, SCATTER_FORWARD);
    VecScatterEnd  (mToAll, vec, mReplicated, INSERT_VALUES, SCATTER_FORWARD);
#else
//PETSc-2.3.2 or previous
    VecScatterBegin(vec, mReplicated, INSERT_VALUES, SCATTER_FORWARD, mToAll);
    VecScatterEnd  (vec, mReplicated, INSERT_VALUES, SCATTER_FORWARD, mToAll);
#endif
 
    // Information is now in mReplicated PETSc vector
    // Copy into mData
    double* p_replicated;
    VecGetArray(mReplicated, &p_replicated);
    for (unsigned i=0; i<size; i++)
    {
        mpData[i] = p_replicated[i];
    }
}