VertexMeshWriter.hpp

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This file is part of Chaste.
 
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*/
#ifndef VERTEXMESHWRITER_HPP_
#define VERTEXMESHWRITER_HPP_
 
// Forward declaration prevents circular include chain
template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class VertexMesh;
 
#define _BACKWARD_BACKWARD_WARNING_H 1 //Cut out the strstream deprecated warning for now (gcc4.3)
#include <vtkDoubleArray.h>
#include <vtkCellData.h>
#include <vtkPointData.h>
#include <vtkConvexPointSet.h>
#include <vtkPolygon.h>
#include <vtkUnstructuredGrid.h>
#include <vtkUnstructuredGridWriter.h>
#include <vtkXMLUnstructuredGridWriter.h>
#include <vtkDataCompressor.h>
 
#include "VertexMesh.hpp"
#include "AbstractMeshWriter.hpp"
#include "NodeMap.hpp"
 
// Forward declaration prevents circular include chain
template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class VertexMesh;
 
template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
struct MeshWriterIterators;
 
template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class VertexMeshWriter : public AbstractMeshWriter<ELEMENT_DIM, SPACE_DIM>
{
private:
    VertexMesh<ELEMENT_DIM,SPACE_DIM>* mpMesh;
 
    MeshWriterIterators<ELEMENT_DIM,SPACE_DIM>* mpIters;
 
    NodeMap* mpNodeMap;
    unsigned mNodeMapCurrentIndex;
 
    vtkUnstructuredGrid* mpVtkUnstructedMesh;
 
public:
 
    VertexMeshWriter(const std::string& rDirectory,
                     const std::string& rBaseName,
                     const bool clearOutputDir=true);
 
    ~VertexMeshWriter();
 
 
    void WriteFilesUsingMesh(VertexMesh<ELEMENT_DIM, SPACE_DIM>& rMesh);
 
    void WriteVtkUsingMesh(VertexMesh<ELEMENT_DIM, SPACE_DIM>& rMesh, std::string stamp="");
 
    void MakeVtkMesh(VertexMesh<ELEMENT_DIM, SPACE_DIM>& rMesh);
 
    void AddCellData(std::string dataName, std::vector<double> dataPayload);
 
    void AddPointData(std::string dataName, std::vector<double> dataPayload);
 
    std::vector<double> GetNextNode();
 
    ElementData GetNextElement();
 
    VertexElementData GetNextElementWithFaces();
 
    void WriteFiles();
};
 
#endif /*VERTEXMESHWRITER_HPP_*/