CellwiseSourcePde< DIM > Class Template Reference

#include <CellwiseSourcePde.hpp>

Inheritance diagram for CellwiseSourcePde< DIM >:

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Collaboration diagram for CellwiseSourcePde< DIM >:

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List of all members.

Public Member Functions
	CellwiseSourcePde (MeshBasedCellPopulation< DIM > &rCellPopulation, double coefficient)
double	ComputeConstantInUSourceTerm (const ChastePoint< DIM > &rX)
double	ComputeLinearInUCoeffInSourceTerm (const ChastePoint< DIM > &rX, Element< DIM, DIM > *pElement)
double	ComputeLinearInUCoeffInSourceTermAtNode (const Node< DIM > &rNode)
c_matrix< double, DIM, DIM >	ComputeDiffusionTerm (const ChastePoint< DIM > &rX)
Private Attributes
MeshBasedCellPopulation< DIM > &	mrCellPopulation
double	mCoefficient

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Detailed Description

template<unsigned DIM>
class CellwiseSourcePde< DIM >

A PDE which has a source at each non-apoptotic cell.

Definition at line 38 of file CellwiseSourcePde.hpp.

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Constructor & Destructor Documentation

template<unsigned DIM>

CellwiseSourcePde< DIM >::CellwiseSourcePde	(	MeshBasedCellPopulation< DIM > &	rCellPopulation,
		double	coefficient
	)			[inline]

Constructor.

Parameters:

	rCellPopulation	reference to the cell population
	coefficient	the coefficient of consumption of nutrient by cells

Definition at line 33 of file CellwiseSourcePde.cpp.

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Member Function Documentation

template<unsigned DIM>

double CellwiseSourcePde< DIM >::ComputeConstantInUSourceTerm

(

const ChastePoint< DIM > &

rX

)

[inline]

Overridden ComputeConstantInUSourceTerm() method.

Parameters:

rX

The point in space

Returns:

the constant in u part of the source term, i.e g(x) in Div(D Grad u) + f(x)u + g(x) = 0.

Definition at line 40 of file CellwiseSourcePde.cpp.

template<unsigned DIM>

double CellwiseSourcePde< DIM >::ComputeLinearInUCoeffInSourceTerm	(	const ChastePoint< DIM > &	rX,
		Element< DIM, DIM > *	pElement
	)			[inline]

Overridden ComputeLinearInUCoeffInSourceTerm() method.

Parameters:

	rX	The point in space
	pElement	the element

Returns:

the coefficient of u in the linear part of the source term, i.e f(x) in Div(D Grad u) + f(x)u + g(x) = 0.

Definition at line 46 of file CellwiseSourcePde.cpp.

References NEVER_REACHED.

template<unsigned DIM>

double CellwiseSourcePde< DIM >::ComputeLinearInUCoeffInSourceTermAtNode

(

const Node< DIM > &

rNode

)

[inline]

Overridden ComputeLinearInUCoeffInSourceTermAtNode() method.

Parameters:

rNode

reference to the node

Definition at line 53 of file CellwiseSourcePde.cpp.

References Node< SPACE_DIM >::GetIndex(), CellwiseSourcePde< DIM >::mCoefficient, and CellwiseSourcePde< DIM >::mrCellPopulation.

template<unsigned DIM>

c_matrix< double, DIM, DIM > CellwiseSourcePde< DIM >::ComputeDiffusionTerm

(

const ChastePoint< DIM > &

rX

)

[inline]

Overridden ComputeDiffusionTerm() method.

Parameters:

rX

The point in space at which the diffusion term is computed

Returns:

a matrix.

Definition at line 70 of file CellwiseSourcePde.cpp.

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Member Data Documentation

template<unsigned DIM>

MeshBasedCellPopulation<DIM>& CellwiseSourcePde< DIM >::mrCellPopulation [private]

The cell population member.

Definition at line 43 of file CellwiseSourcePde.hpp.

Referenced by CellwiseSourcePde< DIM >::ComputeLinearInUCoeffInSourceTermAtNode().

template<unsigned DIM>

double CellwiseSourcePde< DIM >::mCoefficient [private]

Coefficient of consumption of nutrient by cells.

Definition at line 46 of file CellwiseSourcePde.hpp.

Referenced by CellwiseSourcePde< DIM >::ComputeLinearInUCoeffInSourceTermAtNode().

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The documentation for this class was generated from the following files:

• cell_based/src/population/pdes/CellwiseSourcePde.hpp
• cell_based/src/population/pdes/CellwiseSourcePde.cpp