Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM > Class Template Reference

#include <Hdf5ToVtkConverter.hpp>

Inheritance diagram for Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >:

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Collaboration diagram for Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >:

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List of all members.

Public Member Functions
	Hdf5ToVtkConverter (std::string inputDirectory, std::string fileBaseName, AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, bool parallelVtk)

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Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >

This class converts from Hdf5 format to Vtk format. The output will be one .vtu file with separate vtkPointData for each time step.

Definition at line 39 of file Hdf5ToVtkConverter.hpp.

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Constructor & Destructor Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >::Hdf5ToVtkConverter	(	std::string	inputDirectory,
		std::string	fileBaseName,
		AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *	pMesh,
		bool	parallelVtk
	)			[inline]

Constructor, which does the conversion and writes the .vtu file.

Note:

This method is collective, and hence must be called by all processes.

Parameters:

	inputDirectory	The input directory, relative to CHASTE_TEST_OUTPUT, where the .h5 file has been written
	fileBaseName	The base name of the data file.
	pMesh	Pointer to the mesh.
	parallelVtk	- when true, write with pvtu and fragment meshes (only works for DistributedTetrahedralMesh)

Todo:

What if the mesh has been scaled, translated or rotated?

Definition at line 43 of file Hdf5ToVtkConverter.cpp.

References VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >::AddPointData(), DistributedVectorFactory::CreateVec(), AbstractMesh< ELEMENT_DIM, SPACE_DIM >::GetDistributedVectorFactory(), Hdf5DataReader::GetNumberOfRows(), DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::GetNumLocalNodes(), AbstractMesh< ELEMENT_DIM, SPACE_DIM >::GetNumNodes(), Hdf5DataReader::GetUnlimitedDimensionValues(), Hdf5DataReader::GetVariableNames(), Hdf5DataReader::GetVariableOverNodes(), HeartConfig::Instance(), AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >::mNumVariables, AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >::mpMesh, AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >::mpReader, VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >::SetParallelFiles(), VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMesh(), and AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMeshReader().

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The documentation for this class was generated from the following files:

• heart/src/postprocessing/Hdf5ToVtkConverter.hpp
• heart/src/postprocessing/Hdf5ToVtkConverter.cpp