Alarcon2004OxygenBasedCellCycleModel.hpp

/*

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*/

#ifndef ALARCON2004OXYGENBASEDCELLCYCLEMODEL_HPP_
#define ALARCON2004OXYGENBASEDCELLCYCLEMODEL_HPP_

#include "ChasteSerialization.hpp"
#include <boost/serialization/base_object.hpp>

#include <vector>

#include "AbstractOdeBasedPhaseBasedCellCycleModel.hpp"
#include "Alarcon2004OxygenBasedCellCycleOdeSystem.hpp"

class Alarcon2004OxygenBasedCellCycleModel : public AbstractOdeBasedPhaseBasedCellCycleModel
{
private:

    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<AbstractOdeBasedPhaseBasedCellCycleModel>(*this);
    }

    void AdjustOdeParameters(double currentTime);

protected:

    Alarcon2004OxygenBasedCellCycleModel(const Alarcon2004OxygenBasedCellCycleModel& rModel);

public:

    Alarcon2004OxygenBasedCellCycleModel(boost::shared_ptr<AbstractCellCycleModelOdeSolver> pOdeSolver = boost::shared_ptr<AbstractCellCycleModelOdeSolver>());

    virtual void ResetForDivision();

    AbstractCellCycleModel* CreateCellCycleModel();

    void Initialise();

    virtual void OutputCellCycleModelParameters(out_stream& rParamsFile);
};

// Declare identifier for the serializer
#include "SerializationExportWrapper.hpp"
CHASTE_CLASS_EXPORT(Alarcon2004OxygenBasedCellCycleModel)
#include "CellCycleModelOdeSolverExportWrapper.hpp"
EXPORT_CELL_CYCLE_MODEL_ODE_SOLVER(Alarcon2004OxygenBasedCellCycleModel)

#endif /*ALARCON2004OXYGENBASEDCELLCYCLEMODEL_HPP_*/