CellAgesWriter.cpp

/*

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*/

#include "CellAgesWriter.hpp"
#include "AbstractCellPopulation.hpp"

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
CellAgesWriter<ELEMENT_DIM, SPACE_DIM>::CellAgesWriter()
    : AbstractCellWriter<ELEMENT_DIM, SPACE_DIM>("cellages.dat")
{
    this->mVtkCellDataName = "Ages";
}

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
double CellAgesWriter<ELEMENT_DIM, SPACE_DIM>::GetCellDataForVtkOutput(CellPtr pCell, AbstractCellPopulation<ELEMENT_DIM, SPACE_DIM>* pCellPopulation)
{
    return pCell->GetAge();
}

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
void CellAgesWriter<ELEMENT_DIM, SPACE_DIM>::VisitCell(CellPtr pCell, AbstractCellPopulation<ELEMENT_DIM, SPACE_DIM>* pCellPopulation)
{
    // Write location index corresponding to cell
    *this->mpOutStream << pCellPopulation->GetLocationIndexUsingCell(pCell) << " ";

    // Write cell location
    c_vector<double, SPACE_DIM> cell_location = pCellPopulation->GetLocationOfCellCentre(pCell);
    for (unsigned i=0; i<SPACE_DIM; i++)
    {
        *this->mpOutStream << cell_location[i] << " ";
    }

    // Write cell age
    *this->mpOutStream << pCell->GetAge() << " ";
}

// Explicit instantiation
template class CellAgesWriter<1,1>;
template class CellAgesWriter<1,2>;
template class CellAgesWriter<2,2>;
template class CellAgesWriter<1,3>;
template class CellAgesWriter<2,3>;
template class CellAgesWriter<3,3>;

#include "SerializationExportWrapperForCpp.hpp"
// Declare identifier for the serializer
EXPORT_TEMPLATE_CLASS_ALL_DIMS(CellAgesWriter)