, including all inherited members.
| AbstractCardiacCell(boost::shared_ptr< AbstractIvpOdeSolver > pOdeSolver, unsigned numberOfStateVariables, unsigned voltageIndex, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus) | AbstractCardiacCell | |
| AbstractCardiacCellInterface(boost::shared_ptr< AbstractIvpOdeSolver > pOdeSolver, unsigned voltageIndex, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus) | AbstractCardiacCellInterface | |
| AbstractOdeSystem(unsigned numberOfStateVariables) | AbstractOdeSystem | |
| AbstractParameterisedSystem(unsigned numberOfStateVariables) | AbstractParameterisedSystem< std::vector< double > > | |
| AbstractUntemplatedParameterisedSystem(unsigned numberOfStateVariables) | AbstractUntemplatedParameterisedSystem | |
| AdjustOutOfRangeSlowValues(std::vector< double > &rSlowValues) | AbstractCardiacCell | [virtual] |
| Asurf | CorriasBuistICCModified | [private] |
| Asurf_in_cm_square | CorriasBuistICCModified | [private] |
| b | CorriasBuistICCModified | [private] |
| boost::serialization::access class | CorriasBuistICCModified | [friend] |
| Ca_o | CorriasBuistICCModified | [private] |
| CalculateRootFunction(double time, const std::vector< double > &rY) | AbstractOdeSystem | [virtual] |
| CalculateStoppingEvent(double time, const std::vector< double > &rY) | AbstractOdeSystem | [virtual] |
| Cl_i | CorriasBuistICCModified | [private] |
| Cl_o | CorriasBuistICCModified | [private] |
| Cm | CorriasBuistICCModified | [private] |
| Compute(double tStart, double tEnd, double tSamp=0.0) | AbstractCardiacCell | [virtual] |
| ComputeDerivedQuantities(double time, const std::vector< double > &rState) | AbstractParameterisedSystem< std::vector< double > > | [virtual] |
| ComputeDerivedQuantitiesFromCurrentState(double time) | AbstractParameterisedSystem< std::vector< double > > | |
| ComputeExceptVoltage(double tStart, double tEnd) | AbstractCardiacCell | [virtual] |
| conc | CorriasBuistICCModified | [private] |
| CorriasBuistICCModified(boost::shared_ptr< AbstractIvpOdeSolver > pSolver, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus) | CorriasBuistICCModified | |
| d_ACT | CorriasBuistICCModified | [private] |
| d_INH | CorriasBuistICCModified | [private] |
| d_IP3 | CorriasBuistICCModified | [private] |
| deltaPsi | CorriasBuistICCModified | [private] |
| deltaPsi_B | CorriasBuistICCModified | [private] |
| deltaPsi_star | CorriasBuistICCModified | [private] |
| DumpState(const std::string &rMessage) | AbstractParameterisedSystem< std::vector< double > > | [protected] |
| DumpState(const std::string &rMessage, std::vector< double >Y) | AbstractParameterisedSystem< std::vector< double > > | [protected] |
| e2FoRTdPsiMdPsiS | CorriasBuistICCModified | [private] |
| E_Cl | CorriasBuistICCModified | [private] |
| E_K | CorriasBuistICCModified | [private] |
| E_Na | CorriasBuistICCModified | [private] |
| E_NSCC | CorriasBuistICCModified | [private] |
| ebFoRTdPsiMdPsiS | CorriasBuistICCModified | [private] |
| EvaluateYDerivatives(double time, const std::vector< double > &rY, std::vector< double > &rDY) | CorriasBuistICCModified | [virtual] |
| F | CorriasBuistICCModified | [private] |
| fc | CorriasBuistICCModified | [private] |
| fe | CorriasBuistICCModified | [private] |
| fm | CorriasBuistICCModified | [private] |
| FoRT | CorriasBuistICCModified | [private] |
| G_max_bk | CorriasBuistICCModified | [private] |
| G_max_BK | CorriasBuistICCModified | [private] |
| G_max_CaCl | CorriasBuistICCModified | [private] |
| G_max_ERG | CorriasBuistICCModified | [private] |
| G_max_kv11 | CorriasBuistICCModified | [private] |
| G_max_Ltype | CorriasBuistICCModified | [private] |
| G_max_Na | CorriasBuistICCModified | [private] |
| G_max_NSCC | CorriasBuistICCModified | [private] |
| G_max_VDDR | CorriasBuistICCModified | [private] |
| GetAnyVariable(unsigned index, double time=0.0, std::vector< double > *pDerivedQuantities=NULL) | AbstractParameterisedSystem< std::vector< double > > | |
| GetAnyVariable(const std::string &rName, double time=0.0, std::vector< double > *pDerivedQuantities=NULL) | AbstractParameterisedSystem< std::vector< double > > | |
| GetAnyVariableIndex(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetAnyVariableUnits(unsigned index) const | AbstractUntemplatedParameterisedSystem | |
| GetAnyVariableUnits(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetAttribute(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetCarbonMonoxideScaleFactor() | CorriasBuistICCModified | |
| GetDerivedQuantityIndex(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetDerivedQuantityUnits(unsigned index) const | AbstractUntemplatedParameterisedSystem | |
| GetIIonic(const std::vector< double > *pStateVariables=NULL) | CorriasBuistICCModified | [virtual] |
| GetInitialConditions() const | AbstractParameterisedSystem< std::vector< double > > | |
| GetIntracellularAreaStimulus(double time) | AbstractCardiacCellInterface | |
| GetIntracellularCalciumConcentration() | AbstractCardiacCell | [virtual] |
| GetIntracellularStimulus(double time) | AbstractCardiacCellInterface | |
| GetLookupTableCollection() | AbstractCardiacCellInterface | [inline, virtual] |
| GetNumberOfAttributes() const | AbstractUntemplatedParameterisedSystem | |
| GetNumberOfDerivedQuantities() const | AbstractUntemplatedParameterisedSystem | |
| GetNumberOfParameters() const | AbstractUntemplatedParameterisedSystem | |
| GetNumberOfStateVariables() const | AbstractUntemplatedParameterisedSystem | |
| GetNumSlowValues() | AbstractCardiacCell | [virtual] |
| GetParameter(unsigned index) const | AbstractParameterisedSystem< std::vector< double > > | |
| GetParameter(const std::string &rName) const | AbstractParameterisedSystem< std::vector< double > > | |
| GetParameterIndex(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetParameterUnits(unsigned index) const | AbstractUntemplatedParameterisedSystem | |
| GetSlowValues(std::vector< double > &rSlowValues) | AbstractCardiacCell | [virtual] |
| GetSolver() const | AbstractCardiacCellInterface | |
| GetStateVariable(unsigned index) const | AbstractParameterisedSystem< std::vector< double > > | |
| GetStateVariable(const std::string &rName) const | AbstractParameterisedSystem< std::vector< double > > | |
| GetStateVariableIndex(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetStateVariables() | AbstractParameterisedSystem< std::vector< double > > | |
| GetStateVariableUnits(unsigned index) const | AbstractUntemplatedParameterisedSystem | |
| GetStimulus(double time) | AbstractCardiacCellInterface | |
| GetStimulusFunction() | AbstractCardiacCellInterface | |
| GetStimulusFunction() const | AbstractCardiacCellInterface | |
| GetSystemInformation() const | AbstractUntemplatedParameterisedSystem | |
| GetSystemName() const | AbstractUntemplatedParameterisedSystem | |
| GetUseAnalyticJacobian() | AbstractOdeSystem | |
| GetVoltage() | AbstractCardiacCell | [virtual] |
| GetVoltageIndex() | AbstractCardiacCellInterface | |
| HasAnyVariable(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| HasAttribute(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| HasCellMLDefaultStimulus() | AbstractCardiacCellInterface | |
| HasDerivedQuantity(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| HasParameter(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| HasStateVariable(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| Init() | AbstractCardiacCell | |
| IsFastOnly() | AbstractCardiacCell | [virtual] |
| J_ERleak | CorriasBuistICCModified | [private] |
| J_max_leak | CorriasBuistICCModified | [private] |
| J_max_PMCA | CorriasBuistICCModified | [private] |
| J_max_PMCA_PU | CorriasBuistICCModified | [private] |
| Jmax_IP3 | CorriasBuistICCModified | [private] |
| Jmax_NaCa | CorriasBuistICCModified | [private] |
| Jmax_serca | CorriasBuistICCModified | [private] |
| Jmax_uni | CorriasBuistICCModified | [private] |
| K_act | CorriasBuistICCModified | [private] |
| K_Ca | CorriasBuistICCModified | [private] |
| K_i | CorriasBuistICCModified | [private] |
| K_Na | CorriasBuistICCModified | [private] |
| K_o | CorriasBuistICCModified | [private] |
| k_serca | CorriasBuistICCModified | [private] |
| K_trans | CorriasBuistICCModified | [private] |
| L | CorriasBuistICCModified | [private] |
| mDt | AbstractCardiacCell | [protected] |
| mFractionOfVDDRInPU | CorriasBuistICCModified | [private] |
| mHasDefaultStimulusFromCellML | AbstractCardiacCellInterface | [protected] |
| mIP3Concentration | CorriasBuistICCModified | [private] |
| mIsUsedInTissue | AbstractCardiacCellInterface | [protected] |
| mNumberOfStateVariables | AbstractUntemplatedParameterisedSystem | [protected] |
| mParameters | AbstractParameterisedSystem< std::vector< double > > | [protected] |
| mpIntracellularStimulus | AbstractCardiacCellInterface | [protected] |
| mpOdeSolver | AbstractCardiacCellInterface | [protected] |
| mpSystemInfo | AbstractUntemplatedParameterisedSystem | [protected] |
| mScaleFactorCarbonMonoxide | CorriasBuistICCModified | [private] |
| mScaleFactorSerca | CorriasBuistICCModified | [private] |
| mSetVoltageDerivativeToZero | AbstractCardiacCellInterface | [protected] |
| mStateVariables | AbstractParameterisedSystem< std::vector< double > > | [protected] |
| mUseAnalyticJacobian | AbstractOdeSystem | [protected] |
| mVoltageIndex | AbstractCardiacCellInterface | [protected] |
| na | CorriasBuistICCModified | [private] |
| Na_i | CorriasBuistICCModified | [private] |
| Na_o | CorriasBuistICCModified | [private] |
| NaPerm_o_Kperm | CorriasBuistICCModified | [private] |
| P_cyto | CorriasBuistICCModified | [private] |
| P_ER | CorriasBuistICCModified | [private] |
| P_mito | CorriasBuistICCModified | [private] |
| P_PU | CorriasBuistICCModified | [private] |
| Q10Ca | CorriasBuistICCModified | [private] |
| Q10K | CorriasBuistICCModified | [private] |
| Q10Na | CorriasBuistICCModified | [private] |
| R | CorriasBuistICCModified | [private] |
| ResetToInitialConditions() | AbstractParameterisedSystem< std::vector< double > > | |
| rGetConstStateVariables() const | AbstractOdeSystem | |
| rGetDerivedQuantityNames() const | AbstractUntemplatedParameterisedSystem | |
| rGetDerivedQuantityUnits() const | AbstractUntemplatedParameterisedSystem | |
| rGetParameterNames() const | AbstractUntemplatedParameterisedSystem | |
| rGetParameterUnits() const | AbstractUntemplatedParameterisedSystem | |
| rGetStateVariableNames() const | AbstractUntemplatedParameterisedSystem | |
| rGetStateVariables() | AbstractParameterisedSystem< std::vector< double > > | |
| rGetStateVariableUnits() const | AbstractUntemplatedParameterisedSystem | |
| RToF | CorriasBuistICCModified | [private] |
| serialize(Archive &archive, const unsigned int version) | CorriasBuistICCModified | [inline, private] |
| SetAnyVariable(unsigned index, double value) | AbstractParameterisedSystem< std::vector< double > > | |
| SetAnyVariable(const std::string &rName, double value) | AbstractParameterisedSystem< std::vector< double > > | |
| SetCarbonMonoxideScaleFactor(double scaleFactor) | CorriasBuistICCModified | |
| SetDefaultInitialCondition(unsigned index, double initialCondition) | AbstractParameterisedSystem< std::vector< double > > | |
| SetDefaultInitialConditions(const std::vector< double > &rInitialConditions) | AbstractParameterisedSystem< std::vector< double > > | |
| SetFractionOfVDDRInPU(double fraction) | CorriasBuistICCModified | |
| SetIntracellularStimulusFunction(boost::shared_ptr< AbstractStimulusFunction > pStimulus) | AbstractCardiacCellInterface | |
| SetIP3Concentration(double concentration) | CorriasBuistICCModified | |
| SetParameter(const std::string &rName, double value) | AbstractParameterisedSystem< std::vector< double > > | |
| SetParameter(unsigned index, double value) | AbstractParameterisedSystem< std::vector< double > > | |
| SetSercaPumpScaleFactor(double scaleFactor) | CorriasBuistICCModified | |
| SetSlowValues(const std::vector< double > &rSlowValues) | AbstractCardiacCell | [virtual] |
| SetState(CellModelState state) | AbstractCardiacCell | [virtual] |
| SetStateVariable(unsigned index, double newValue) | AbstractParameterisedSystem< std::vector< double > > | |
| SetStateVariable(const std::string &rName, double newValue) | AbstractParameterisedSystem< std::vector< double > > | |
| SetStateVariables(const std::vector< double > &rStateVariables) | AbstractParameterisedSystem< std::vector< double > > | |
| SetStimulusFunction(boost::shared_ptr< AbstractStimulusFunction > pStimulus) | AbstractCardiacCellInterface | |
| SetStretch(double stretch) | AbstractCardiacCell | [inline, virtual] |
| SetTimestep(double dt) | AbstractCardiacCell | [virtual] |
| SetUsedInTissueSimulation(bool tissue=true) | AbstractCardiacCellInterface | |
| SetVoltage(double voltage) | AbstractCardiacCell | [virtual] |
| SetVoltageDerivativeToZero(bool clamp=true) | AbstractCardiacCellInterface | [virtual] |
| SolveAndUpdateState(double tStart, double tEnd) | AbstractCardiacCell | [virtual] |
| T | CorriasBuistICCModified | [private] |
| T_correction_BK | CorriasBuistICCModified | [private] |
| T_correction_Ca | CorriasBuistICCModified | [private] |
| T_correction_K | CorriasBuistICCModified | [private] |
| T_correction_Na | CorriasBuistICCModified | [private] |
| T_exp | CorriasBuistICCModified | [private] |
| tau_d_CaCl | CorriasBuistICCModified | [private] |
| tau_d_ERG | CorriasBuistICCModified | [private] |
| tau_d_kv11 | CorriasBuistICCModified | [private] |
| tau_d_Ltype | CorriasBuistICCModified | [private] |
| tau_d_Na | CorriasBuistICCModified | [private] |
| tau_d_NSCC | CorriasBuistICCModified | [private] |
| tau_d_VDDR | CorriasBuistICCModified | [private] |
| tau_f_ca_Ltype | CorriasBuistICCModified | [private] |
| tau_f_kv11 | CorriasBuistICCModified | [private] |
| tau_f_Ltype | CorriasBuistICCModified | [private] |
| tau_f_Na | CorriasBuistICCModified | [private] |
| tau_f_VDDR | CorriasBuistICCModified | [private] |
| tauh | CorriasBuistICCModified | [private] |
| UseCellMLDefaultStimulus() | AbstractCardiacCellInterface | [virtual] |
| V_cyto | CorriasBuistICCModified | [private] |
| V_ER | CorriasBuistICCModified | [private] |
| V_MITO | CorriasBuistICCModified | [private] |
| V_PU | CorriasBuistICCModified | [private] |
| VerifyStateVariables() | CorriasBuistICCModified | [virtual] |
| Vol | CorriasBuistICCModified | [private] |
| ~AbstractCardiacCell() | AbstractCardiacCell | [virtual] |
| ~AbstractCardiacCellInterface() | AbstractCardiacCellInterface | [virtual] |
| ~AbstractOdeSystem() | AbstractOdeSystem | [virtual] |
| ~AbstractUntemplatedParameterisedSystem() | AbstractUntemplatedParameterisedSystem | [virtual] |
| ~CorriasBuistICCModified() | CorriasBuistICCModified | |
