ExtendedBidomainProblem< DIM > Member List

This is the complete list of members for ExtendedBidomainProblem< DIM >, including all inherited members.
AbstractCardiacProblem(AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM > *pCellFactory)AbstractCardiacProblem< DIM, DIM, 3 >
AbstractCardiacProblem()AbstractCardiacProblem< DIM, DIM, 3 >
AnalyseMeshForBath()ExtendedBidomainProblem< DIM > [protected]
AtBeginningOfTimestep(double time)AbstractCardiacProblem< DIM, DIM, 3 > [inline, virtual]
boost::serialization::access classExtendedBidomainProblem< DIM > [friend]
CardiacElectroMechanicsProblem classAbstractCardiacProblem< DIM, DIM, 3 > [friend]
CloseFilesAndPostProcess()AbstractCardiacProblem< DIM, DIM, 3 >
CreateCardiacTissue()ExtendedBidomainProblem< DIM > [inline, protected, virtual]
CreateInitialCondition()ExtendedBidomainProblem< DIM > [inline, protected, virtual]
CreateSolver()ExtendedBidomainProblem< DIM > [inline, protected, virtual]
DefineExtraVariablesWriterColumns(bool extending)AbstractCardiacProblem< DIM, DIM, 3 >
DefineWriterColumns(bool extending)ExtendedBidomainProblem< DIM > [inline, virtual]
ExtendedBidomainProblem(AbstractCardiacCellFactory< DIM > *pCellFactory, AbstractCardiacCellFactory< DIM > *pSecondCellFactory, bool hasBath=false)ExtendedBidomainProblem< DIM > [inline]
ExtendedBidomainProblem()ExtendedBidomainProblem< DIM > [inline]
GetCurrentTime()AbstractCardiacProblem< DIM, DIM, 3 >
GetDataReader()AbstractCardiacProblem< DIM, DIM, 3 >
GetExtendedBidomainTissue()ExtendedBidomainProblem< DIM > [inline]
GetHasBath()ExtendedBidomainProblem< DIM > [inline, virtual]
GetSolution()AbstractCardiacProblem< DIM, DIM, 3 >
GetSolutionDistributedVector()AbstractCardiacProblem< DIM, DIM, 3 >
GetTissue()AbstractCardiacProblem< DIM, DIM, 3 >
Initialise()AbstractCardiacProblem< DIM, DIM, 3 >
InitialiseWriter()AbstractCardiacProblem< DIM, DIM, 3 >
load(Archive &archive, const unsigned int version)ExtendedBidomainProblem< DIM > [inline, private]
LoadExtraArchive(Archive &archive, unsigned version)AbstractCardiacProblem< DIM, DIM, 3 > [inline]
mAllocatedMemoryForMeshAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mAmFirstCellExtendedBidomainProblem< DIM > [protected]
mAmGapExtendedBidomainProblem< DIM > [protected]
mAmSecondCellExtendedBidomainProblem< DIM > [protected]
mApplyAveragePhieZeroConstraintAfterSolvingExtendedBidomainProblem< DIM > [protected]
mCmFirstCellExtendedBidomainProblem< DIM > [protected]
mCmSecondCellExtendedBidomainProblem< DIM > [protected]
mCurrentTimeAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mExtraVariablesIdAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mFixedExtracellularPotentialNodesExtendedBidomainProblem< DIM > [protected]
mGGapExtendedBidomainProblem< DIM > [protected]
mGgapHeterogeneityRegionsExtendedBidomainProblem< DIM > [protected]
mGgapHeterogenousValuesExtendedBidomainProblem< DIM > [protected]
mHasBathExtendedBidomainProblem< DIM > [protected]
mIntracellularConductivitiesSecondCellExtendedBidomainProblem< DIM > [protected]
mMeshFilenameAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mNodeColumnIdAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mNodesToOutputAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mpBoundaryConditionsContainerAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mpCardiacTissueAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mpCellFactoryAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mpDefaultBoundaryConditionsContainerAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mpExtendedBidomainTissueExtendedBidomainProblem< DIM > [protected]
mpExtracellularStimulusFactoryExtendedBidomainProblem< DIM > [protected]
mpMeshAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mPrintOutputAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mpSecondCellFactoryExtendedBidomainProblem< DIM > [protected]
mpSolverExtendedBidomainProblem< DIM > [protected]
mpTimeAdaptivityControllerAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mpWriterAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mRowForAverageOfPhiZeroedExtendedBidomainProblem< DIM > [protected]
mSolutionAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mTimeColumnIdAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mUserHasSetBidomainValuesExplicitlyExtendedBidomainProblem< DIM > [protected]
mUserSpecifiedSecondCellConductivitiesExtendedBidomainProblem< DIM > [protected]
mUserSuppliedExtracellularStimulusExtendedBidomainProblem< DIM > [protected]
mVariablesIDsExtendedBidomainProblem< DIM > [protected]
mVoltageColumnIdAbstractCardiacProblem< DIM, DIM, 3 > [protected]
mVoltageColumnId_PhieExtendedBidomainProblem< DIM > [protected]
mVoltageColumnId_Vm1ExtendedBidomainProblem< DIM > [protected]
mVoltageColumnId_Vm2ExtendedBidomainProblem< DIM > [protected]
mWriteInfoAbstractCardiacProblem< DIM, DIM, 3 > [protected]
OnEndOfTimestep(double time)AbstractCardiacProblem< DIM, DIM, 3 > [inline, virtual]
PreSolveChecks()ExtendedBidomainProblem< DIM > [inline, virtual]
PrintOutput(bool rPrintOutput)AbstractCardiacProblem< DIM, DIM, 3 >
ProcessExtracellularStimulus()ExtendedBidomainProblem< DIM > [inline, protected]
rGetMesh()AbstractCardiacProblem< DIM, DIM, 3 >
save(Archive &archive, const unsigned int version) const ExtendedBidomainProblem< DIM > [inline, private]
SetBoundaryConditionsContainer(BccType pBcc)AbstractCardiacProblem< DIM, DIM, 3 >
SetElectrodes()AbstractCardiacProblem< DIM, DIM, 3 > [virtual]
SetExtendedBidomainParameters(double Am1, double Am2, double AmGap, double Cm1, double Cm2, double Ggap)ExtendedBidomainProblem< DIM > [inline]
SetExtracellularStimulusFactory(AbstractStimulusFactory< DIM > *pFactory)ExtendedBidomainProblem< DIM > [inline]
SetFixedExtracellularPotentialNodes(std::vector< unsigned > nodes)ExtendedBidomainProblem< DIM > [inline]
SetGgapHeterogeneities(std::vector< boost::shared_ptr< AbstractChasteRegion< DIM > > > &rGgapHeterogeneityRegions, std::vector< double > &rGgapValues)ExtendedBidomainProblem< DIM > [inline]
SetHasBath(bool hasBath)ExtendedBidomainProblem< DIM > [inline]
SetIntracellularConductivitiesForSecondCell(c_vector< double, DIM > conductivities)ExtendedBidomainProblem< DIM > [inline]
SetMesh(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh)AbstractCardiacProblem< DIM, DIM, 3 >
SetNodeForAverageOfPhiZeroed(unsigned node)ExtendedBidomainProblem< DIM > [inline]
SetNodesPerProcessorFilename(const std::string &rFilename)AbstractCardiacProblem< DIM, DIM, 3 >
SetOutputNodes(std::vector< unsigned > &rNodesToOutput)AbstractCardiacProblem< DIM, DIM, 3 >
SetUpAdditionalStoppingTimes(std::vector< double > &rAdditionalStoppingTimes)AbstractCardiacProblem< DIM, DIM, 3 > [inline, virtual]
SetUseTimeAdaptivityController(bool useAdaptivity, AbstractTimeAdaptivityController *pController=NULL)AbstractCardiacProblem< DIM, DIM, 3 >
SetWriteInfo(bool writeInfo=true)AbstractCardiacProblem< DIM, DIM, 3 >
Solve()AbstractCardiacProblem< DIM, DIM, 3 >
TestArchivingExtendedBidomain (defined in ExtendedBidomainProblem< DIM >)ExtendedBidomainProblem< DIM > [friend]
WriteExtraVariablesOneStep()AbstractCardiacProblem< DIM, DIM, 3 >
WriteInfo(double time)ExtendedBidomainProblem< DIM > [inline, virtual]
WriteOneStep(double time, Vec voltageVec)ExtendedBidomainProblem< DIM > [inline, virtual]
~AbstractCardiacProblem()AbstractCardiacProblem< DIM, DIM, 3 > [virtual]
~AbstractUntemplatedCardiacProblem()AbstractUntemplatedCardiacProblem [inline, virtual]
~ExtendedBidomainProblem()ExtendedBidomainProblem< DIM > [inline]
Generated on Thu Dec 22 13:04:53 2011 for Chaste by  doxygen 1.6.3