Chaste Release::3.1
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00001 /* 00002 00003 Copyright (c) 2005-2012, University of Oxford. 00004 All rights reserved. 00005 00006 University of Oxford means the Chancellor, Masters and Scholars of the 00007 University of Oxford, having an administrative office at Wellington 00008 Square, Oxford OX1 2JD, UK. 00009 00010 This file is part of Chaste. 00011 00012 Redistribution and use in source and binary forms, with or without 00013 modification, are permitted provided that the following conditions are met: 00014 * Redistributions of source code must retain the above copyright notice, 00015 this list of conditions and the following disclaimer. 00016 * Redistributions in binary form must reproduce the above copyright notice, 00017 this list of conditions and the following disclaimer in the documentation 00018 and/or other materials provided with the distribution. 00019 * Neither the name of the University of Oxford nor the names of its 00020 contributors may be used to endorse or promote products derived from this 00021 software without specific prior written permission. 00022 00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00033 00034 */ 00035 00036 00037 #ifndef _ABSTRACTTETRAHEDRALELEMENT_HPP_ 00038 #define _ABSTRACTTETRAHEDRALELEMENT_HPP_ 00039 00040 #include <vector> 00041 00042 #include "UblasMatrixInclude.hpp" 00043 #include "UblasVectorInclude.hpp" 00044 00045 #include "AbstractElement.hpp" 00046 #include "Node.hpp" 00047 00051 template <unsigned ELEMENT_DIM, unsigned SPACE_DIM> 00052 class AbstractTetrahedralElement : public AbstractElement<ELEMENT_DIM,SPACE_DIM> 00053 { 00054 protected: 00055 00061 void RefreshJacobian(c_matrix<double, SPACE_DIM, ELEMENT_DIM>& rJacobian); 00062 00063 public: 00064 00071 AbstractTetrahedralElement(unsigned index, const std::vector<Node<SPACE_DIM>*>& rNodes); 00072 00079 AbstractTetrahedralElement(unsigned index=INDEX_IS_NOT_USED); 00080 00084 virtual ~AbstractTetrahedralElement() 00085 {} 00086 00090 c_vector<double, SPACE_DIM> CalculateCentroid() const; 00091 00098 void CalculateJacobian(c_matrix<double, SPACE_DIM, ELEMENT_DIM>& rJacobian, 00099 double& rJacobianDeterminant); 00100 00107 void CalculateWeightedDirection(c_vector<double, SPACE_DIM>& rWeightedDirection, double& rJacobianDeterminant); 00108 00112 c_vector<double, SPACE_DIM> CalculateNormal(); 00113 00121 void CalculateInverseJacobian(c_matrix<double, SPACE_DIM, ELEMENT_DIM>& rJacobian, 00122 double& rJacobianDeterminant, 00123 c_matrix<double, ELEMENT_DIM, SPACE_DIM>& rInverseJacobian); 00124 00129 double GetVolume(double determinant) const; 00130 00139 void GetStiffnessMatrixGlobalIndices(unsigned problemDim, unsigned* pIndices) const; 00140 }; 00141 00143 // Specialization for 0d elements // 00145 00150 template<unsigned SPACE_DIM> 00151 class AbstractTetrahedralElement<0, SPACE_DIM> : public AbstractElement<0,SPACE_DIM> 00152 { 00153 public: 00154 00161 AbstractTetrahedralElement(unsigned index, const std::vector<Node<SPACE_DIM>*>& rNodes); 00162 00169 AbstractTetrahedralElement(unsigned index=INDEX_IS_NOT_USED); 00170 00174 virtual ~AbstractTetrahedralElement() 00175 {} 00176 00180 c_vector<double, SPACE_DIM> CalculateCentroid() const; 00181 00188 void CalculateWeightedDirection(c_vector<double, SPACE_DIM>& rWeightedDirection, double& rJacobianDeterminant); 00189 00193 c_vector<double, SPACE_DIM> CalculateNormal(); 00194 00203 void GetStiffnessMatrixGlobalIndices(unsigned problemDim, unsigned* pIndices) const; 00204 }; 00205 00206 #endif //_ABSTRACTTETRAHEDRALELEMENT_HPP_