Chaste Release::3.1
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00001 /* 00002 00003 Copyright (c) 2005-2012, University of Oxford. 00004 All rights reserved. 00005 00006 University of Oxford means the Chancellor, Masters and Scholars of the 00007 University of Oxford, having an administrative office at Wellington 00008 Square, Oxford OX1 2JD, UK. 00009 00010 This file is part of Chaste. 00011 00012 Redistribution and use in source and binary forms, with or without 00013 modification, are permitted provided that the following conditions are met: 00014 * Redistributions of source code must retain the above copyright notice, 00015 this list of conditions and the following disclaimer. 00016 * Redistributions in binary form must reproduce the above copyright notice, 00017 this list of conditions and the following disclaimer in the documentation 00018 and/or other materials provided with the distribution. 00019 * Neither the name of the University of Oxford nor the names of its 00020 contributors may be used to endorse or promote products derived from this 00021 software without specific prior written permission. 00022 00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00033 00034 */ 00035 #ifndef DISTANCEMAPCALCULATOR_HPP_ 00036 #define DISTANCEMAPCALCULATOR_HPP_ 00037 00038 #include <vector> 00039 #include <queue> 00040 00041 #include "UblasIncludes.hpp" 00042 #include "AbstractTetrahedralMesh.hpp" 00043 00051 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM> 00052 class DistanceMapCalculator 00053 { 00054 private: 00055 friend class TestDistanceMapCalculator; 00056 00058 AbstractTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>& mrMesh; 00060 unsigned mNumNodes; 00062 unsigned mLo; 00064 unsigned mHi; 00066 bool mWorkOnEntireMesh; 00068 unsigned *mNumHalosPerProcess; 00070 std::vector<unsigned> mHaloNodeIndices; 00072 unsigned mRoundCounter; 00074 unsigned mPopCounter; 00076 unsigned mTargetNodeIndex; 00078 bool mSingleTarget; 00080 c_vector<double, SPACE_DIM> mTargetNodePoint; 00081 00088 std::priority_queue<std::pair<double, unsigned> > mActivePriorityNodeIndexQueue; 00089 00098 bool WorkOnLocalQueue(std::vector<double>& rNodeDistances); 00099 00109 bool UpdateQueueFromRemote(std::vector<double>& rNodeDistances); 00110 00117 void PushLocal(double priority, unsigned nodeIndex) 00118 { 00119 00120 if (mLo<=nodeIndex && nodeIndex<mHi) 00121 { 00122 //Push a negative priority so that the lowest one (nearest the surface) is popped first 00123 mActivePriorityNodeIndexQueue.push(std::pair<double, unsigned>(-priority, nodeIndex)); 00124 } 00125 } 00126 00127 public: 00128 00134 DistanceMapCalculator(AbstractTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>& rMesh); 00138 ~DistanceMapCalculator() 00139 { 00140 delete [] mNumHalosPerProcess; 00141 } 00142 00152 void ComputeDistanceMap(const std::vector<unsigned>& rSourceNodeIndices, 00153 std::vector<double>& rNodeDistances); 00161 double SingleDistance(unsigned sourceNodeIndex, unsigned destinationNodeIndex); 00162 00163 }; 00164 00165 #endif /*DISTANCEMAPCALCULATOR_HPP_*/