Class Index

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A	Alarcon2004OxygenBasedCellCycleModel	D	MemfemMeshReader	R
AbstractAlgebraicContractionModel	Alarcon2004OxygenBasedCellCycleOdeSystem	DataAtQuadraturePoint_	memorypool	RadialSloughingCellKiller
AbstractAssemblerSolverHybrid	ApcOneHitCellMutationState	DataWriterVariable	mesh	RampedQuarterStimulusCellFactory
AbstractBackwardEulerCardiacCell	ApcTwoHitCellMutationState	DeltaNotchCellCycleModel	MeshalyzerMeshWriter	RandomCellKiller
AbstractBidomainSolver	ApoptoticCellKiller	DeltaNotchOdeSystem	MeshBasedCellPopulation	RandomNumberGenerator
AbstractBoundaryCondition	ApoptoticCellProperty	DeltaNotchOffLatticeSimulation	MeshBasedCellPopulationWithGhostNodes	RegularStimulus
AbstractBoundaryConditionsContainer	ArchiveLocationInfo	DifferentialAdhesionPottsUpdateRule	MeshPottsWriterIterators	RegularStimulusZeroNetCharge
AbstractCachedMeshReader	ArchiveOpener	DifferentiatedCellProliferativeType	MeshSemWriterIterators	RelativeTo
AbstractCardiacCell	AveragedSourcePde	DiffusionForce	MeshWriterIterators	ReplicatableVector
AbstractCardiacCellFactory	AxisymmetricConductivityTensors	DiffusionMultipleCaUpdateRule	Mirams2010WntOdeSystem	RepulsionForce
AbstractCardiacCellInterface	B	DiscreteSystemForceCalculator	MixedDimensionMesh	RungeKutta2IvpOdeSolver
AbstractCardiacCellWithModifiers	BackwardEulerIvpOdeSolver	DistanceMapCalculator	MockEulerIvpOdeSolver	RungeKutta4IvpOdeSolver
AbstractCardiacFeVolumeIntegralAssembler	badsubseg	DistributedQuadraticMesh	MonodomainAssembler	RungeKuttaFehlbergIvpOdeSolver
AbstractCardiacMechanicsSolver	badtriang	DistributedTetrahedralMesh	MonodomainCorrectionTermAssembler	S
AbstractCardiacMechanicsSolverInterface	BathCellFactory	DistributedTetrahedralMeshPartitionType	MonodomainProblem	S1S2Stimulus
AbstractCardiacProblem	behavior	DistributedVector	MonodomainSolver	SchmidCostaExponentialLaw2d
AbstractCardiacTissue	BetaCateninOneHitCellMutationState	DistributedVectorException	MonodomainStiffnessMatrixAssembler	SemElementData
AbstractCellBasedSimulation	BidomainAssembler	DistributedVectorFactory	MonodomainTissue	SemMesh::SemElementIterator
AbstractCellBasedTestSuite	BidomainCorrectionTermAssembler	DummyModifier	MooneyRivlinMaterialLaw	SemMesh
AbstractCellCycleModel	BidomainMassMatrixAssembler	DynamicCellModelLoader	MultipleCaBasedCellPopulation	SemMeshGenerator
AbstractCellCycleModelOdeSolver	BidomainNeumannSurfaceTermAssembler	DynamicModelLoaderRegistry	MultiStimulus	SemMeshReader
AbstractCellKiller	BidomainProblem	DynamicRestitutionStimulus	MutableElement	SemMeshWriter
AbstractCellMutationState	BidomainSolver	E	MutableElement< 1, SPACE_DIM >	SerializableSingleton
AbstractCellPopulation	BidomainTissue	TetrahedralMesh::EdgeIterator	MutableMesh	SimpleDataWriter
AbstractCellPopulationBoundaryCondition	BidomainWithBathAssembler	ELASTICITY_SOLVER	MutableVertexMesh	SimpleLinearEllipticSolver
AbstractCellProliferativeType	BidomainWithBathProblem	Electrodes	N	SimpleLinearParabolicSolver
AbstractCellProperty	BoundaryConditionsContainer	ElectrodesStimulusFactory	NagaiHondaDifferentialAdhesionForce	SimpleNewtonNonlinearSolver
AbstractCentreBasedCellPopulation	BoundaryElement	ElectroMechanicsProblemDefinition	NagaiHondaForce	SimpleNonlinearEllipticSolver
AbstractChasteRegion	Box	Element	Nash2004ContractionModel	SimpleOxygenBasedCellCycleModel
AbstractCompressibleMaterialLaw	BoxCollection	ElementAndWeights	NashHunterPoleZeroLaw	SimplePetscNonlinearSolver
AbstractConductivityModifier	BuskeAdhesiveForce	ElementData	NaturalNeumannSurfaceTermAssembler	SimpleStimulus
AbstractConductivityTensors	BuskeCompressionForce	AbstractTetrahedralMesh::ElementIterator	NhsContractionModel	SimpleUniformSourcePde
AbstractContinuumMechanicsAssembler	BuskeElasticForce	AbstractMeshReader::ElementIterator	NhsModelWithBackwardSolver	SimpleWntCellCycleModel
AbstractContinuumMechanicsSolver	C	enable_shared_from_this (boost)	Node	SimulationTime
AbstractContractionModel	CARDIAC_CELL	EulerIvpOdeSolver	NodeBasedCellPopulation	SingleOdeWntCellCycleModel
AbstractConvergenceTester	CardiacElectroMechanicsProblem	event	NodeBasedCellPopulationWithBuskeUpdate	SloughingCellKiller
AbstractCorrectionTermAssembler	CardiacElectroMechProbRegularGeom	AbstractLookupTableCollection::EventHandler	NodeBasedCellPopulationWithParticles	SolidMechanicsProblemDefinition
AbstractCryptStatistics	CardiacNewtonSolver	Exception	AbstractMeshReader::NodeIterator	SpaceConvergenceTester
AbstractCvodeCell	CardiacSimulation	ExecutableSupport	AbstractMesh::NodeIterator	SphereGeometryBoundaryCondition
AbstractCvodeSystem	CardiacSimulationArchiver	ExplicitCardiacMechanicsSolver	NodeMap	splaynode
AbstractDataReader	Cell	ExponentialMaterialLaw	NodePartitioner	MeshBasedCellPopulation::SpringIterator
AbstractDataWriter	CellAncestor	ExtendedBidomainAssembler	NodesOnlyMesh	SteadyStateRunner
AbstractDynamicallyLoadableEntity	CellBasedEventHandler	ExtendedBidomainMassMatrixAssembler	NonCachedTetrahedralMesh	StemCellProliferativeType
AbstractDynamicLinearPdeSolver	CellBasedPdeHandler	ExtendedBidomainNeumannSurfaceTermAssembler	noncopyable (boost)	StiffnessMatrixAssembler
AbstractElement	CellBasedPdeSolver	ExtendedBidomainProblem	NonlinearElasticityTools	StimulusBoundaryCondition
AbstractExtendedBidomainSolver	CellBasedSimulationArchiver	ExtendedBidomainSolver	NonPhysiologicalContractionModel	StochasticDurationCellCycleModel
AbstractFeAssemblerCommon	CellCycleModelOdeHandler	ExtendedBidomainTissue	null_deleter	StochasticDurationGenerationBasedCellCycleModel
AbstractFeAssemblerInterface	CellCycleModelOdeSolver	F	NumericFileComparison	StochasticOxygenBasedCellCycleModel
AbstractFeCableIntegralAssembler	CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >	FactorModifier	O	StochasticWntCellCycleModel
AbstractFeSurfaceIntegralAssembler	CellData	FakeBathCell	ObjectCommunicator	StokesFlowAssembler
AbstractFeVolumeIntegralAssembler	CellId	FakeBathContractionModel	OdeConvergenceTester	StokesFlowPreconditionerAssembler
AbstractFileComparison	CellLabel	FemlabMeshReader	OdeLinearSystemSolver	StokesFlowProblemDefinition
AbstractForce	CellMLLoader	FibreReader	OdePdeConvergenceTester	StokesFlowSolver
AbstractFunctionalCalculator	CellMLToSharedLibraryConverter	FibreWriter	OdeSolution	StreeterFibreGenerator
AbstractHdf5Converter	CellProperties	FileComparison	OdeSystemForCoupledHeatEquation	DistributedVector::Stripe
AbstractIncompressibleMaterialLaw	CellPropertyCollection	FileFinder	OdeSystemForCoupledHeatEquationWithSource	SurfaceAreaConstraintPottsUpdateRule
AbstractIsotropicCompressibleMaterialLaw	CellPropertyRegistry	XmlTools::Finalizer	OdeSystemInformation	T
AbstractIsotropicIncompressibleMaterialLaw	CellsGenerator	FineCoarseMeshPair	OffLatticeSimulation	TargetedCellKiller
AbstractIvpOdeSolver	CellwiseDataGradient	FitzHughNagumo1961OdeSystem	OnLatticeSimulation	CxxTest::TestSuite
AbstractLinearEllipticPde	CellwiseOdeSystemInformation	FixedDurationGenerationBasedCellCycleModel	OperatorSplittingMonodomainSolver	TetrahedralMesh
AbstractLinearParabolicPde	CellwiseSourcePde	FixedModifier	OrthotropicConductivityTensors	TimeModifier
AbstractLinearParabolicPdeSystemForCoupledOdeSystem	ChasteBuildInfo	flipstacker	osub	Timer
AbstractLinearPdeSolver	ChasteCuboid	FourthOrderTensor	otri	TimeStepper
AbstractLookupTableCollection	ChasteEllipsoid	FunctionalBoundaryCondition	OutputDirectoryFifoQueue	TransitCellProliferativeType
AbstractMaterialLaw	ChasteNodesList	G	OutputFileHandler	TrianglesMeshReader
AbstractMesh	ChastePoint	GaussianQuadratureRule	P	TrianglesMeshWriter
AbstractMeshReader	ChastePoint< 0 >	GeneralisedLinearSpringForce	pack< void(T)>	TysonNovak2001OdeSystem
AbstractMeshWriter	ChemotacticForce	GeneralPlaneStimulusCellFactory	PapillaryFibreCalculator	TysonNovakCellCycleModel
AbstractModifier	ChemotaxisPottsUpdateRule	GenericEventHandler	ParallelColumnDataWriter	V
AbstractMultipleCaUpdateRule	DistributedVector::Chunk	CxxTest::GlobalFixture	PCBlockDiagonal	VanLeeuwen2009WntSwatCellCycleModelHypothesisOne
AbstractNonlinearAssemblerSolverHybrid	CmguiDeformedSolutionsWriter	H	PCBlockDiagonal::PCBlockDiagonalContext	VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo
AbstractNonlinearElasticitySolver	CmguiMeshWriter	Hdf5DataReader	PCLDUFactorisation	VanLeeuwen2009WntSwatCellCycleOdeSystem
AbstractNonlinearEllipticPde	CML_noble_varghese_kohl_noble_1998_basic_with_sac	Hdf5DataWriter	PCLDUFactorisation::PCLDUFactorisationContext	CombinedOdeSystem::VariableParameterMap
AbstractNonlinearSolver	ColumnDataReader	Hdf5ToCmguiConverter	PCTwoLevelsBlockDiagonal	version< AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > > (boost::serialization)
AbstractOdeBasedCellCycleModel	ColumnDataWriter	Hdf5ToMeshalyzerConverter	PCTwoLevelsBlockDiagonal::PCTwoLevelsBlockDiagonalContext	version< AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM > > (boost::serialization)
AbstractOdeBasedContractionModel	CombinedOdeSystem	Hdf5ToTxtConverter	PdeAndBoundaryConditions	version< AbstractChasteRegion< SPACE_DIM > > (boost::serialization)
AbstractOdeSystem	CombinedOdeSystemInformation	Hdf5ToVtkConverter	PdeConvergenceTester	version< AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > > (boost::serialization)
AbstractOdeSystemForCoupledPdeSystem	CommandLineArguments	HeartConfig	PdeSimulationTime	VertexBasedCellPopulation
AbstractOdeSystemInformation	CompareDoubles	HeartConfigRelatedCellFactory	PetscMatTools	VertexCryptBoundaryForce
AbstractOdeSystemWithAnalyticJacobian	CompressibleExponentialLaw	HeartEventHandler	PetscSetup	VertexElement
AbstractOffLatticeCellPopulation	CompressibleMooneyRivlinMaterialLaw	HeartFileFinder	PetscTools	VertexElement< 1, SPACE_DIM >
AbstractOneStepIvpOdeSolver	CompressibleNonlinearElasticitySolver	HeartGeometryInformation	PetscVecTools	VertexElementData
AbstractOnLatticeCellPopulation	ConstBoundaryCondition	HeartRegionCode	PlaneBasedCellKiller	VertexMesh::VertexElementIterator
AbstractParameterisedSystem	ContactInhibitionCellCycleModel	HeunIvpOdeSolver	PlaneBoundaryCondition	VertexElementMap
AbstractPerElementWriter	Node::ContainingBoundaryElementIterator	HoneycombMeshGenerator	PlaneStimulusCellFactory	VertexMesh
AbstractPottsUpdateRule	Node::ContainingElementIterator	HoneycombVertexMeshGenerator	PoleZeroMaterialLaw	VertexMeshReader
AbstractPurkinjeCellFactory	ContinuumMechanicsNeumannBcsAssembler	I	PolynomialMaterialLaw3d	VertexMeshWriter
AbstractRushLarsenCardiacCell	ContinuumMechanicsProblemDefinition	Identifiable	PostProcessingWriter	VoltageInterpolaterOntoMechanicsMesh
AbstractSimpleCellCycleModel	ContractionModelInputParameters_	ImplicitCardiacMechanicsSolver	PottsBasedCellPopulation	VolumeConstraintPottsUpdateRule
AbstractSimpleGenerationBasedCellCycleModel	CorriasBuistICCModified	IncompressibleNonlinearElasticitySolver	PottsElement	VolumeDependentAveragedSourcePde
AbstractStaticLinearPdeSolver	CorriasBuistSMCModified	CombinedOdeSystemInformation::InstancePointers	PottsElementData	VolumeTrackedOffLatticeSimulation
AbstractSteadyStateRunner	CreateElectricsProblem	DistributedVector::Iterator	PottsMesh::PottsElementIterator	VtkMeshReader
AbstractStimulusFactory	CreateElectricsProblem< DIM, 1u >	AbstractCellPopulation::Iterator	PottsMesh	VtkMeshWriter
AbstractStimulusFunction	CreateElectricsProblem< DIM, 2u >	iterator_facade (boost)	PottsMeshGenerator	W
AbstractTetrahedralElement	CryptCellsGenerator	K	PottsMeshReader	Warnings
AbstractTetrahedralElement< 0, SPACE_DIM >	CryptProjectionForce	Kerchoffs2003ContractionModel	PottsMeshWriter	WelikyOsterForce
AbstractTetrahedralMesh	CryptProjectionStatistics	L	ProcessSpecificArchive	WildTypeCellMutationState
AbstractTetrahedralMeshWriter	CryptSimulation1d	LessThanNode	ProgressReporter	WntCellCycleModel
AbstractTimeAdaptivityController	CryptSimulation2d	LinearBasisFunction	PropagationPropertiesCalculator	WntCellCycleOdeSystem
AbstractTwoBodyInteractionForce	CryptSimulationBoundaryCondition	LinearBasisFunction< 0 >	PseudoEcgCalculator	WntConcentration
AbstractUntemplatedCardiacProblem	CryptStatistics	LinearParabolicPdeSystemWithCoupledOdeSystemSolver	PurkinjeVentricularJunctionStimulus	X
AbstractUntemplatedConvergenceTester	CuboidMeshConstructor	LinearSpringWithVariableSpringConstantsForce	Q	XmlTools
AbstractUntemplatedParameterisedSystem	CvodeAdaptor	LinearSystem	QuadraticBasisFunction	XmlTransforms
AbstractVanLeeuwen2009WntSwatCellCycleModel	CvodeData_	LogFile	QuadraticBasisFunction< 0 >	Z
AbstractWntOdeBasedCellCycleModel	Cylindrical2dMesh	M	QuadraticMesh	ZeroNetChargeElectrodes
AdaptiveBidomainProblem	Cylindrical2dVertexMesh	MassMatrixAssembler	QuadraticMeshHelper	ZeroStimulus
AdaptiveTetrahedralMesh	CylindricalHoneycombMeshGenerator	MechanicsEventHandler	QuadraturePointsGroup	ZeroStimulusCellFactory
AdhesionPottsUpdateRule	CylindricalHoneycombVertexMeshGenerator

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