Chaste Release::3.1
Public Member Functions
Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM > Class Template Reference

#include <Hdf5ToVtkConverter.hpp>

Inheritance diagram for Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >:
Collaboration diagram for Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >:

List of all members.

Public Member Functions

 Hdf5ToVtkConverter (std::string inputDirectory, std::string fileBaseName, AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, bool parallelVtk, bool usingOriginalNodeOrdering)

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >

This class converts from Hdf5 format to Vtk format. The output will be one .vtu file with separate vtkPointData for each time step.

Definition at line 46 of file Hdf5ToVtkConverter.hpp.

Constructor & Destructor Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >::Hdf5ToVtkConverter ( std::string  inputDirectory,
std::string  fileBaseName,
AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *  pMesh,
bool  parallelVtk,
bool  usingOriginalNodeOrdering 
)

Constructor, which does the conversion and writes the .vtu file.

Note:
This method is collective, and hence must be called by all processes.
Parameters:
inputDirectoryThe input directory, relative to CHASTE_TEST_OUTPUT, where the .h5 file has been written
fileBaseNameThe base name of the data file.
pMeshPointer to the mesh.
parallelVtkWhen true, write with .pvtu and fragment meshes (only works for DistributedTetrahedralMesh)
usingOriginalNodeOrderingWhether HDF5 output was written using the original node ordering

Todo:
What if the mesh has been scaled, translated or rotated?

Definition at line 49 of file Hdf5ToVtkConverter.cpp.

References VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >::AddPointData(), DistributedVectorFactory::CreateVec(), PetscTools::Destroy(), AbstractMesh< ELEMENT_DIM, SPACE_DIM >::GetDistributedVectorFactory(), Hdf5DataReader::GetNumberOfRows(), DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::GetNumLocalNodes(), AbstractMesh< ELEMENT_DIM, SPACE_DIM >::GetNumNodes(), Hdf5DataReader::GetUnlimitedDimensionValues(), Hdf5DataReader::GetVariableNames(), Hdf5DataReader::GetVariableOverNodes(), AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >::mNumVariables, AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >::mpMesh, AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >::mpReader, AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >::mRelativeSubdirectory, VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >::SetParallelFiles(), VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMesh(), and AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >::WriteFilesUsingMeshReader().

The documentation for this class was generated from the following files: