BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM > Class Template Reference

#include <BidomainWithBathAssembler.hpp>

Inheritance diagram for BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM >:

Collaboration diagram for BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM >:

List of all members.

Public Member Functions
	BidomainWithBathAssembler (AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, BidomainTissue< SPACE_DIM > *pTissue, unsigned numQuadPoints=2)
	~BidomainWithBathAssembler ()
Protected Member Functions
virtual c_matrix< double, 2 *(ELEMENT_DIM+1), 2 *(ELEMENT_DIM+1)>	ComputeMatrixTerm (c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, 2 > &rU, c_matrix< double, 2, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement)

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Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM >

Assembler for assembling the LHS matrix system solved in bidomain problems with a perfusing bath. See FEM implementations document for the exact definition of this.

Definition at line 50 of file BidomainWithBathAssembler.hpp.

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Constructor & Destructor Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM >::BidomainWithBathAssembler	(	AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *	pMesh,
		BidomainTissue< SPACE_DIM > *	pTissue,
		unsigned	numQuadPoints = 2
	)		[inline]

Constructor.

Parameters:

pMesh	pointer to the mesh
pTissue	pointer to the tissue
numQuadPoints	number of quadrature points (defaults to 2)

Definition at line 80 of file BidomainWithBathAssembler.hpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM >::~BidomainWithBathAssembler

(

)

[inline]

Destructor.

Definition at line 90 of file BidomainWithBathAssembler.hpp.

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Member Function Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

c_matrix< double, 2 *(ELEMENT_DIM+1), 2 *(ELEMENT_DIM+1)> BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM >::ComputeMatrixTerm	(	c_vector< double, ELEMENT_DIM+1 > &	rPhi,
		c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &	rGradPhi,
		ChastePoint< SPACE_DIM > &	rX,
		c_vector< double, 2 > &	rU,
		c_matrix< double, 2, SPACE_DIM > &	rGradU,
		Element< ELEMENT_DIM, SPACE_DIM > *	pElement
	)		[protected, virtual]

Overloaded ComputeMatrixTerm() - calls the base class version for tissue elements.

Parameters:

rPhi	The basis functions, rPhi(i) = phi_i, i=1..numBases
rGradPhi	Basis gradients, rGradPhi(i,j) = d(phi_j)/d(X_i)
rX	The point in space
rU	The unknown as a vector, u(i) = u_i
rGradU	The gradient of the unknown as a matrix, rGradU(i,j) = d(u_i)/d(X_j)
pElement	Pointer to the element

Reimplemented from BidomainAssembler< ELEMENT_DIM, SPACE_DIM >.

Definition at line 41 of file BidomainWithBathAssembler.cpp.

References BidomainAssembler< ELEMENT_DIM, SPACE_DIM >::ComputeMatrixTerm(), AbstractElement< ELEMENT_DIM, SPACE_DIM >::GetAttribute(), HeartConfig::GetBathConductivity(), AbstractElement< ELEMENT_DIM, SPACE_DIM >::GetUnsignedAttribute(), HeartConfig::Instance(), and HeartRegionCode::IsRegionBath().

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The documentation for this class was generated from the following files:

• heart/src/solver/electrics/bidomain/BidomainWithBathAssembler.hpp
• heart/src/solver/electrics/bidomain/BidomainWithBathAssembler.cpp