Chaste Release::3.1
AbstractLookupTableCollection Class Reference

#include <AbstractLookupTableCollection.hpp>

Collaboration diagram for AbstractLookupTableCollection:

List of all members.

Classes

class  EventHandler

Public Member Functions

 AbstractLookupTableCollection ()
std::vector< std::string > GetKeyingVariableNames () const
unsigned GetNumberOfTables (const std::string &rKeyingVariableName) const
void GetTableProperties (const std::string &rKeyingVariableName, double &rMin, double &rStep, double &rMax) const
void SetTableProperties (const std::string &rKeyingVariableName, double min, double step, double max)
void SetTimestep (double dt)
virtual void RegenerateTables ()=0
virtual ~AbstractLookupTableCollection ()

Protected Member Functions

unsigned GetTableIndex (const std::string &rKeyingVariableName) const

Protected Attributes

std::vector< std::string > mKeyingVariableNames
std::vector< unsignedmNumberOfTables
std::vector< doublemTableSteps
std::vector< doublemTableStepInverses
std::vector< doublemTableMins
std::vector< doublemTableMaxs
std::vector< boolmNeedsRegeneration
double mDt

Detailed Description

Base class for lookup tables used in optimised cells generated by PyCml. Contains methods to query and adjust table parameters (i.e. size and spacing), and an event handler to time table generation.

Definition at line 49 of file AbstractLookupTableCollection.hpp.


Constructor & Destructor Documentation

AbstractLookupTableCollection::AbstractLookupTableCollection ( )

Default constructor.

Definition at line 40 of file AbstractLookupTableCollection.cpp.

AbstractLookupTableCollection::~AbstractLookupTableCollection ( ) [virtual]

Virtual destructor since we have a virtual method.

Definition at line 110 of file AbstractLookupTableCollection.cpp.


Member Function Documentation

std::vector< std::string > AbstractLookupTableCollection::GetKeyingVariableNames ( ) const

Get the names of variables used to index lookup tables.

Definition at line 45 of file AbstractLookupTableCollection.cpp.

References mKeyingVariableNames.

unsigned AbstractLookupTableCollection::GetNumberOfTables ( const std::string &  rKeyingVariableName) const

Get the number of lookup tables keyed by the given variable.

Parameters:
rKeyingVariableNamethe table key name

Definition at line 50 of file AbstractLookupTableCollection.cpp.

References GetTableIndex(), and mNumberOfTables.

unsigned AbstractLookupTableCollection::GetTableIndex ( const std::string &  rKeyingVariableName) const [protected]

Get the index of the given keying variable within our vector.

Parameters:
rKeyingVariableNamethe table key name

Definition at line 93 of file AbstractLookupTableCollection.cpp.

References EXCEPTION, and mKeyingVariableNames.

Referenced by GetNumberOfTables(), GetTableProperties(), and SetTableProperties().

void AbstractLookupTableCollection::GetTableProperties ( const std::string &  rKeyingVariableName,
double rMin,
double rStep,
double rMax 
) const

Get the properties of lookup tables keyed by the given variable.

Parameters:
rKeyingVariableNamethe table key name
rMinwill be filled with the lower table bound
rStepwill be filled with the table spacing
rMaxwill be filled with the upper table bound

Definition at line 55 of file AbstractLookupTableCollection.cpp.

References GetTableIndex(), mTableMaxs, mTableMins, and mTableSteps.

virtual void AbstractLookupTableCollection::RegenerateTables ( ) [pure virtual]

Subclasses implement this method to generate the lookup tables based on the current settings.

void AbstractLookupTableCollection::SetTableProperties ( const std::string &  rKeyingVariableName,
double  min,
double  step,
double  max 
)

Set the properties of lookup tables keyed by the given variable.

Parameters:
rKeyingVariableNamethe table key name
minthe lower table bound
stepthe table spacing; must divide the interval between min and max exactly
maxthe upper table bound

Todo:
remove magic number? (#1884)

Definition at line 63 of file AbstractLookupTableCollection.cpp.

References EXCEPTION, GetTableIndex(), mNeedsRegeneration, mTableMaxs, mTableMins, mTableStepInverses, and mTableSteps.

void AbstractLookupTableCollection::SetTimestep ( double  dt)

With some PyCml settings, the cell model timestep may be included within lookup tables. If the cell's dt is changed, this method must be called to reflect this, and RegenerateTables called to update the tables to match.

Parameters:
dtthe new timestep

Definition at line 84 of file AbstractLookupTableCollection.cpp.

References mDt, and mNeedsRegeneration.


Member Data Documentation

Timestep to use in lookup tables

Definition at line 152 of file AbstractLookupTableCollection.hpp.

Referenced by SetTimestep().

std::vector<std::string> AbstractLookupTableCollection::mKeyingVariableNames [protected]

Names of variables used to index lookup tables

Definition at line 131 of file AbstractLookupTableCollection.hpp.

Referenced by GetKeyingVariableNames(), and GetTableIndex().

Whether the parameters for each set of tables have changed

Definition at line 149 of file AbstractLookupTableCollection.hpp.

Referenced by SetTableProperties(), and SetTimestep().

Number of tables indexed by each variable

Definition at line 134 of file AbstractLookupTableCollection.hpp.

Referenced by GetNumberOfTables().

Upper bound of tables indexed by each variable

Definition at line 146 of file AbstractLookupTableCollection.hpp.

Referenced by GetTableProperties(), and SetTableProperties().

Lower bound of tables indexed by each variable

Definition at line 143 of file AbstractLookupTableCollection.hpp.

Referenced by GetTableProperties(), and SetTableProperties().

Contains the reciprocals of mTableSteps

Definition at line 140 of file AbstractLookupTableCollection.hpp.

Referenced by SetTableProperties().

Spacing of tables indexed by each variable

Definition at line 137 of file AbstractLookupTableCollection.hpp.

Referenced by GetTableProperties(), and SetTableProperties().


The documentation for this class was generated from the following files: