FakeBathCell Class Reference

#include <FakeBathCell.hpp>

Inheritance diagram for FakeBathCell:

Collaboration diagram for FakeBathCell:

List of all members.

Public Member Functions
	FakeBathCell (boost::shared_ptr< AbstractIvpOdeSolver > pSolver, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus)
	~FakeBathCell ()
void	EvaluateYDerivatives (double time, const std::vector< double > &rY, std::vector< double > &rDY)
double	GetIIonic (const std::vector< double > *pStateVariables=NULL)
void	ComputeExceptVoltage (double tStart, double tEnd)
double	GetIntracellularCalciumConcentration ()
Private Member Functions
template<class Archive >
void	serialize (Archive &archive, const unsigned int version)
Friends
class	boost::serialization::access

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Detailed Description

This class represents a fake cell for use within the bath of a bidomain simulation.

Note:

Note that only a portion of the normal functionality of a cardiac cell is actually redefined in this class. If further calls to cardiac cells are later added to the simulation process, additional overrides may need to be added here.

Definition at line 52 of file FakeBathCell.hpp.

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Constructor & Destructor Documentation

FakeBathCell::FakeBathCell	(	boost::shared_ptr< AbstractIvpOdeSolver >	pSolver,
		boost::shared_ptr< AbstractStimulusFunction >	pIntracellularStimulus
	)

Constructor uses the same signature as normal cells, for convenience.

Parameters:

pSolver	unused
pIntracellularStimulus	unused

Definition at line 39 of file FakeBathCell.cpp.

References AbstractCardiacCell::Init(), and AbstractUntemplatedParameterisedSystem::mpSystemInfo.

FakeBathCell::~FakeBathCell

(

)

Destructor; does nothing.

Definition at line 47 of file FakeBathCell.cpp.

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Member Function Documentation

void FakeBathCell::ComputeExceptVoltage	(	double	tStart,
		double	tEnd
	)		[virtual]

There isn't really a cell here, so we override this method to do nothing.

Parameters:

tStart	unused
tEnd	unused

Reimplemented from AbstractCardiacCell.

Definition at line 64 of file FakeBathCell.cpp.

void FakeBathCell::EvaluateYDerivatives	(	double	time,
		const std::vector< double > &	rY,
		std::vector< double > &	rDY
	)		[virtual]

This method is pure in a base class, so we need it, but we never use it. It has an empty body.

Parameters:

time	unused
rY	unused
rDY	unused

Implements AbstractOdeSystem.

Definition at line 53 of file FakeBathCell.cpp.

double FakeBathCell::GetIIonic

(

const std::vector< double > *

pStateVariables = NULL

)

[virtual]

Fake cells have no transmembrane currents, so this method always returns 0.

Parameters:

pStateVariables

unused

Implements AbstractCardiacCellInterface.

Definition at line 59 of file FakeBathCell.cpp.

double FakeBathCell::GetIntracellularCalciumConcentration

(

)

[virtual]

There is really no calcium here, so we override this method to return a dummy value (0) Implementing this with a dummy implementation is needed by mechanics

Returns:

always zero

Reimplemented from AbstractCardiacCellInterface.

Definition at line 68 of file FakeBathCell.cpp.

template<class Archive >

void FakeBathCell::serialize	(	Archive &	archive,
		const unsigned int	version
	)		[inline, private]

Archive this cell. Just calls the base class version.

Parameters:

archive
version

Reimplemented from AbstractCardiacCell.

Definition at line 64 of file FakeBathCell.hpp.

References AbstractUntemplatedParameterisedSystem::mNumberOfStateVariables.

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Friends And Related Function Documentation

friend class boost::serialization::access [friend]

Needed for serialization.

Reimplemented from AbstractCardiacCell.

Definition at line 56 of file FakeBathCell.hpp.

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The documentation for this class was generated from the following files:

• heart/src/odes/ionicmodels/FakeBathCell.hpp
• heart/src/odes/ionicmodels/FakeBathCell.cpp