RungeKuttaFehlbergIvpOdeSolver.hpp

/*

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 * Redistributions of source code must retain the above copyright notice,
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 * Redistributions in binary form must reproduce the above copyright notice,
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   software without specific prior written permission.

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IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
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*/

#ifndef _RUNGEKUTTAFEHLBERGIVPODESOLVER_HPP_
#define _RUNGEKUTTAFEHLBERGIVPODESOLVER_HPP_

#include "ChasteSerialization.hpp"
#include <boost/serialization/base_object.hpp>

#include "AbstractOneStepIvpOdeSolver.hpp"

class RungeKuttaFehlbergIvpOdeSolver : public AbstractIvpOdeSolver
{
friend class TestRungeKuttaFehlbergIvpOdeSolver;

private:
    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        // This calls serialize on the base class - all member variables instantiated on construction or temporary.
        archive & boost::serialization::base_object<AbstractIvpOdeSolver>(*this);
    }

    /*
     * All these are here for more efficient memory allocation, rather than
     * because they need to be member variables.
     */

    double m1932o2197;  
    double m7200o2197;  
    double m7296o2197;  
    double m12o13;      
    double m439o216;    
    double m3680o513;   
    double m845o4104;   
    double m8o27;       
    double m3544o2565;  
    double m1859o4104;  
    double m1o360;      
    double m128o4275;   
    double m2197o75240; 
    double m2o55;       
    double m25o216;     
    double m1408o2565;  
    double m2197o4104;  
    std::vector<double> mError; 
    std::vector<double> mk1;  
    std::vector<double> mk2;  
    std::vector<double> mk3;  
    std::vector<double> mk4;  
    std::vector<double> mk5;  
    std::vector<double> mk6;  
    std::vector<double> myk2; 
    std::vector<double> myk3; 
    std::vector<double> myk4; 
    std::vector<double> myk5; 
    std::vector<double> myk6; 
protected:

    void InternalSolve(OdeSolution& rSolution,
                       AbstractOdeSystem* pAbstractOdeSystem,
                       std::vector<double>& rCurrentYValues,
                       std::vector<double>& rWorkingMemory,
                       double startTime,
                       double endTime,
                       double maxTimeStep,
                       double minTimeStep,
                       double tolerance,
                       bool outputSolution);

    void CalculateNextYValue(AbstractOdeSystem* pAbstractOdeSystem,
                             double timeStep,
                             double time,
                             std::vector<double>& rCurrentYValues,
                             std::vector<double>& rNextYValues);

    void AdjustStepSize(double& rCurrentStepSize,
                        const double& rError,
                        const double& rTolerance,
                        const double& rMaxTimeStep,
                        const double& rMinTimeStep);

public:

    RungeKuttaFehlbergIvpOdeSolver();

    OdeSolution Solve(AbstractOdeSystem* pAbstractOdeSystem,
                      std::vector<double>& rYValues,
                      double startTime,
                      double endTime,
                      double timeStep,
                      double ignoredSamplingTime);

    void Solve(AbstractOdeSystem* pAbstractOdeSystem,
               std::vector<double>& rYValues,
               double startTime,
               double endTime,
               double timeStep);

};

#include "SerializationExportWrapper.hpp"
CHASTE_CLASS_EXPORT(RungeKuttaFehlbergIvpOdeSolver)

#endif //_RUNGEKUTTAFEHLBERGIVPODESOLVER_HPP_