AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM > Member List

This is the complete list of members for AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >, including all inherited members.

AbstractBidomainSolver(bool bathSimulation, AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, BidomainTissue< SPACE_DIM > *pTissue, BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, 2 > *pBoundaryConditions, unsigned numQuadPoints=2)	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >
AbstractDynamicLinearPdeSolver(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
AbstractLinearPdeSolver(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh)	AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >	[inline]
CheckCompatibilityCondition()	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected, virtual]
FinaliseForBath(bool computeMatrix, bool computeVector)	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected]
FinaliseLinearSystem(Vec existingSolution)	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected, virtual]
FollowingSolveLinearSystem(Vec currentSolution)	AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >	[inline, virtual]
GenerateNullBasis() const	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected, virtual]
GetBoundaryConditions()	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[inline]
GetLinearSystem()	AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >	[inline]
InitialiseForSolve(Vec initialSolution)	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected, virtual]
InitialiseHdf5Writer()	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mBathSimulation	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected]
mFilenamePrefix	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mFixedExtracellularPotentialNodes	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected]
mIdealTimeStep	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mInitialCondition	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mLastWorkingTimeStep	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mMatrixIsAssembled	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mMatrixIsConstant	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mNullSpaceCreated	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected]
mNumQuadPoints	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected]
mOutputDirectory	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mOutputToParallelVtk	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mOutputToTxt	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mOutputToVtk	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mpBidomainTissue	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected]
mpBoundaryConditions	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected]
mpConfig	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected]
mpHdf5Writer	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mpLinearSystem	AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >	[protected]
mpMesh	AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >	[protected]
mPrintingTimestepMultiple	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mpTimeAdaptivityController	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mRowForAverageOfPhiZeroed	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected]
mTend	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mTimesSet	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mTstart	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
mVariableColumnIds	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
PrepareForSetupLinearSystem(Vec existingSolution)	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[protected, virtual]
ResetBoundaryConditionsContainer(BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, 2 > *pBcc)	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[inline]
SetFixedExtracellularPotentialNodes(std::vector< unsigned > fixedExtracellularPotentialNodes)	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >
SetInitialCondition(Vec initialCondition)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
SetMatrixIsNotAssembled()	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
SetOutputDirectoryAndPrefix(std::string outputDirectory, std::string prefix)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
SetOutputToParallelVtk(bool output)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
SetOutputToTxt(bool output)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
SetOutputToVtk(bool output)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
SetPrintingTimestepMultiple(unsigned multiple)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
SetRowForAverageOfPhiZeroed(unsigned rowMeanPhiEZero)	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >
SetTimeAdaptivityController(AbstractTimeAdaptivityController *pTimeAdaptivityController)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
SetTimes(double tStart, double tEnd)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
SetTimeStep(double dt)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
SetupLinearSystem(Vec currentSolution, bool computeMatrix)=0	AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >	[pure virtual]
Solve()	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >
WriteOneStep(double time, Vec solution)	AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 2 >	[protected]
~AbstractBidomainSolver()	AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >	[virtual]
~AbstractLinearPdeSolver()	AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >	[inline, virtual]