Chaste Release::3.1
AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > Member List
This is the complete list of members for AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >, including all inherited members.
AbstractCellBasedSimulation(AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > &rCellPopulation, bool deleteCellPopulationInDestructor=false, bool initialiseCells=true)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
AddCellKiller(boost::shared_ptr< AbstractCellKiller< SPACE_DIM > > pCellKiller)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
boost::serialization::access classAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [friend]
CalculateCellDivisionVector(CellPtr pParentCell)=0AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected, pure virtual]
DoCellBirth()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected, virtual]
DoCellRemoval()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
GetCellBasedPdeHandler()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetDt()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetIdentifier() const Identifiable
GetNodeLocation(const unsigned &rNodeIndex)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetNumBirths()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetNumDeaths()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetOutputDirectory()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
GetOutputDivisionLocations()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
mCellKillersAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mDeleteCellPopulationInDestructorAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mDtAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mEndTimeAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mInitialiseCellsAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mNoBirthAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mNumBirthsAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mNumDeathsAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mOutputDirectoryAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mOutputDivisionLocationsAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mpCellBasedPdeHandlerAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mpDivisionLocationFileAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mpVizSetupFileAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mrCellPopulationAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mSamplingTimestepMultipleAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mSimulationOutputDirectoryAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
mUpdateCellPopulationAbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
OutputAdditionalSimulationSetup(out_stream &rParamsFile)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [inline, protected, virtual]
OutputSimulationParameters(out_stream &rParamsFile)=0AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [pure virtual]
OutputSimulationSetup()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected]
RemoveAllCellKillers()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
rGetCellPopulation()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
rGetCellPopulation() const AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
serialize(Archive &archive, const unsigned int version)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [inline, private]
SetCellBasedPdeHandler(CellBasedPdeHandler< SPACE_DIM > *pCellBasedPdeHandler)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetDt(double dt)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetEndTime(double endTime)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetNoBirth(bool noBirth)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetOutputDirectory(std::string outputDirectory)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetOutputDivisionLocations(bool outputDivisionLocations)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetSamplingTimestepMultiple(unsigned samplingTimestepMultiple)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetUpdateCellPopulationRule(bool updateCellPopulation)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
SetupSolve()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [inline, protected, virtual]
Solve()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >
StoppingEventHasOccurred()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected, virtual]
TestCryptSimulation2d (defined in AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [friend]
TestOffLatticeSimulation (defined in AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [friend]
TestOffLatticeSimulation3d (defined in AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM >)AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [friend]
UpdateAtEndOfSolve()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [inline, protected, virtual]
UpdateAtEndOfTimeStep()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [inline, protected, virtual]
UpdateCellLocationsAndTopology()=0AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected, pure virtual]
UpdateCellPopulation()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [protected, virtual]
WriteVisualizerSetupFile()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [inline, protected, virtual]
~AbstractCellBasedSimulation()AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > [virtual]
~Identifiable()Identifiable [virtual]