CorriasBuistICCModified Member List

This is the complete list of members for CorriasBuistICCModified, including all inherited members.

AbstractCardiacCell(boost::shared_ptr< AbstractIvpOdeSolver > pOdeSolver, unsigned numberOfStateVariables, unsigned voltageIndex, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus)	AbstractCardiacCell
AbstractCardiacCellInterface(boost::shared_ptr< AbstractIvpOdeSolver > pOdeSolver, unsigned voltageIndex, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus)	AbstractCardiacCellInterface
AbstractOdeSystem(unsigned numberOfStateVariables)	AbstractOdeSystem
AbstractParameterisedSystem(unsigned numberOfStateVariables)	AbstractParameterisedSystem< std::vector< double > >
AbstractUntemplatedParameterisedSystem(unsigned numberOfStateVariables)	AbstractUntemplatedParameterisedSystem
AdjustOutOfRangeSlowValues(std::vector< double > &rSlowValues)	AbstractCardiacCell	[virtual]
Asurf	CorriasBuistICCModified	[private]
Asurf_in_cm_square	CorriasBuistICCModified	[private]
b	CorriasBuistICCModified	[private]
boost::serialization::access class	CorriasBuistICCModified	[friend]
Ca_o	CorriasBuistICCModified	[private]
CalculateRootFunction(double time, const std::vector< double > &rY)	AbstractOdeSystem	[virtual]
CalculateStoppingEvent(double time, const std::vector< double > &rY)	AbstractOdeSystem	[virtual]
CheckParametersOnLoad(const std::vector< double > &rParameters, const std::vector< std::string > &rParameterNames)	AbstractParameterisedSystem< std::vector< double > >	[protected]
Cl_i	CorriasBuistICCModified	[private]
Cl_o	CorriasBuistICCModified	[private]
Cm	CorriasBuistICCModified	[private]
Compute(double tStart, double tEnd, double tSamp=0.0)	AbstractCardiacCell	[virtual]
ComputeDerivedQuantities(double time, const std::vector< double > &rState)	AbstractParameterisedSystem< std::vector< double > >	[virtual]
ComputeDerivedQuantitiesFromCurrentState(double time)	AbstractParameterisedSystem< std::vector< double > >
ComputeExceptVoltage(double tStart, double tEnd)	AbstractCardiacCell	[virtual]
conc	CorriasBuistICCModified	[private]
CorriasBuistICCModified(boost::shared_ptr< AbstractIvpOdeSolver > pSolver, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus)	CorriasBuistICCModified
d_ACT	CorriasBuistICCModified	[private]
d_INH	CorriasBuistICCModified	[private]
d_IP3	CorriasBuistICCModified	[private]
deltaPsi	CorriasBuistICCModified	[private]
deltaPsi_B	CorriasBuistICCModified	[private]
deltaPsi_star	CorriasBuistICCModified	[private]
DumpState(const std::string &rMessage)	AbstractParameterisedSystem< std::vector< double > >	[protected]
DumpState(const std::string &rMessage, std::vector< double >Y)	AbstractParameterisedSystem< std::vector< double > >	[protected]
e2FoRTdPsiMdPsiS	CorriasBuistICCModified	[private]
E_Cl	CorriasBuistICCModified	[private]
E_K	CorriasBuistICCModified	[private]
E_Na	CorriasBuistICCModified	[private]
E_NSCC	CorriasBuistICCModified	[private]
ebFoRTdPsiMdPsiS	CorriasBuistICCModified	[private]
EvaluateYDerivatives(double time, const std::vector< double > &rY, std::vector< double > &rDY)	CorriasBuistICCModified	[virtual]
F	CorriasBuistICCModified	[private]
fc	CorriasBuistICCModified	[private]
fe	CorriasBuistICCModified	[private]
fm	CorriasBuistICCModified	[private]
FoRT	CorriasBuistICCModified	[private]
G_max_bk	CorriasBuistICCModified	[private]
G_max_BK	CorriasBuistICCModified	[private]
G_max_CaCl	CorriasBuistICCModified	[private]
G_max_ERG	CorriasBuistICCModified	[private]
G_max_kv11	CorriasBuistICCModified	[private]
G_max_Ltype	CorriasBuistICCModified	[private]
G_max_Na	CorriasBuistICCModified	[private]
G_max_NSCC	CorriasBuistICCModified	[private]
G_max_VDDR	CorriasBuistICCModified	[private]
GetAnyVariable(const std::string &rName, double time=0.0)	AbstractCardiacCell	[virtual]
AbstractOdeSystem::GetAnyVariable(unsigned index, double time=0.0, std::vector< double > *pDerivedQuantities=NULL)	AbstractParameterisedSystem< std::vector< double > >
AbstractOdeSystem::GetAnyVariable(const std::string &rName, double time=0.0, std::vector< double > *pDerivedQuantities=NULL)	AbstractParameterisedSystem< std::vector< double > >
GetAnyVariableIndex(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
GetAnyVariableUnits(unsigned index) const	AbstractUntemplatedParameterisedSystem
GetAnyVariableUnits(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
GetAttribute(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
GetCarbonMonoxideScaleFactor()	CorriasBuistICCModified
GetDerivedQuantityIndex(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
GetDerivedQuantityUnits(unsigned index) const	AbstractUntemplatedParameterisedSystem
GetIIonic(const std::vector< double > *pStateVariables=NULL)	CorriasBuistICCModified	[virtual]
GetInitialConditions() const	AbstractParameterisedSystem< std::vector< double > >
GetIntracellularAreaStimulus(double time)	AbstractCardiacCellInterface
GetIntracellularCalciumConcentration()	AbstractCardiacCellInterface	[virtual]
GetIntracellularStimulus(double time)	AbstractCardiacCellInterface
GetLookupTableCollection()	AbstractCardiacCellInterface	[inline, virtual]
GetNumberOfAttributes() const	AbstractUntemplatedParameterisedSystem
GetNumberOfDerivedQuantities() const	AbstractUntemplatedParameterisedSystem
GetNumberOfParameters() const	AbstractCardiacCell	[virtual]
GetNumberOfStateVariables() const	AbstractCardiacCell	[virtual]
GetNumSlowValues()	AbstractCardiacCell	[virtual]
GetParameter(const std::string &rParameterName)	AbstractCardiacCell	[virtual]
GetParameter(unsigned parameterIndex)	AbstractCardiacCell	[virtual]
AbstractOdeSystem::GetParameter(unsigned index) const	AbstractParameterisedSystem< std::vector< double > >
AbstractOdeSystem::GetParameter(const std::string &rName) const	AbstractParameterisedSystem< std::vector< double > >
GetParameterIndex(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
GetParameterUnits(unsigned index) const	AbstractUntemplatedParameterisedSystem
GetSlowValues(std::vector< double > &rSlowValues)	AbstractCardiacCell	[virtual]
GetSolver() const	AbstractCardiacCellInterface
GetStateVariable(unsigned index) const	AbstractParameterisedSystem< std::vector< double > >
GetStateVariable(const std::string &rName) const	AbstractParameterisedSystem< std::vector< double > >
GetStateVariableIndex(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
GetStateVariables()	AbstractParameterisedSystem< std::vector< double > >
GetStateVariableUnits(unsigned index) const	AbstractUntemplatedParameterisedSystem
GetStdVecStateVariables()	AbstractCardiacCell	[virtual]
GetStimulus(double time)	AbstractCardiacCellInterface
GetStimulusFunction()	AbstractCardiacCellInterface
GetStimulusFunction() const	AbstractCardiacCellInterface
GetSystemInformation() const	AbstractUntemplatedParameterisedSystem
GetSystemName() const	AbstractUntemplatedParameterisedSystem
GetUseAnalyticJacobian()	AbstractOdeSystem
GetVoltage()	AbstractCardiacCell	[virtual]
GetVoltageIndex()	AbstractCardiacCellInterface
HasAnyVariable(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
HasAttribute(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
HasCellMLDefaultStimulus()	AbstractCardiacCellInterface
HasDerivedQuantity(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
HasParameter(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
HasStateVariable(const std::string &rName) const	AbstractUntemplatedParameterisedSystem
Init()	AbstractCardiacCell
IsFastOnly()	AbstractCardiacCell	[virtual]
J_ERleak	CorriasBuistICCModified	[private]
J_max_leak	CorriasBuistICCModified	[private]
J_max_PMCA	CorriasBuistICCModified	[private]
J_max_PMCA_PU	CorriasBuistICCModified	[private]
Jmax_IP3	CorriasBuistICCModified	[private]
Jmax_NaCa	CorriasBuistICCModified	[private]
Jmax_serca	CorriasBuistICCModified	[private]
Jmax_uni	CorriasBuistICCModified	[private]
K_act	CorriasBuistICCModified	[private]
K_Ca	CorriasBuistICCModified	[private]
K_i	CorriasBuistICCModified	[private]
K_Na	CorriasBuistICCModified	[private]
K_o	CorriasBuistICCModified	[private]
k_serca	CorriasBuistICCModified	[private]
K_trans	CorriasBuistICCModified	[private]
L	CorriasBuistICCModified	[private]
mDt	AbstractCardiacCell	[protected]
mFixedVoltage	AbstractCardiacCellInterface	[protected]
mFractionOfVDDRInPU	CorriasBuistICCModified	[private]
mHasDefaultStimulusFromCellML	AbstractCardiacCellInterface	[protected]
mIP3Concentration	CorriasBuistICCModified	[private]
mIsUsedInTissue	AbstractCardiacCellInterface	[protected]
mNumberOfStateVariables	AbstractUntemplatedParameterisedSystem	[protected]
mParameters	AbstractParameterisedSystem< std::vector< double > >	[protected]
mpIntracellularStimulus	AbstractCardiacCellInterface	[protected]
mpOdeSolver	AbstractCardiacCellInterface	[protected]
mpSystemInfo	AbstractUntemplatedParameterisedSystem	[protected]
mScaleFactorCarbonMonoxide	CorriasBuistICCModified	[private]
mScaleFactorSerca	CorriasBuistICCModified	[private]
mSetVoltageDerivativeToZero	AbstractCardiacCellInterface	[protected]
mStateVariables	AbstractParameterisedSystem< std::vector< double > >	[protected]
mUseAnalyticJacobian	AbstractOdeSystem	[protected]
mVoltageIndex	AbstractCardiacCellInterface	[protected]
na	CorriasBuistICCModified	[private]
Na_i	CorriasBuistICCModified	[private]
Na_o	CorriasBuistICCModified	[private]
NaPerm_o_Kperm	CorriasBuistICCModified	[private]
P_cyto	CorriasBuistICCModified	[private]
P_ER	CorriasBuistICCModified	[private]
P_mito	CorriasBuistICCModified	[private]
P_PU	CorriasBuistICCModified	[private]
Q10Ca	CorriasBuistICCModified	[private]
Q10K	CorriasBuistICCModified	[private]
Q10Na	CorriasBuistICCModified	[private]
R	CorriasBuistICCModified	[private]
ResetToInitialConditions()	AbstractParameterisedSystem< std::vector< double > >
rGetConstStateVariables() const	AbstractOdeSystem
rGetDerivedQuantityNames() const	AbstractUntemplatedParameterisedSystem
rGetDerivedQuantityUnits() const	AbstractUntemplatedParameterisedSystem
rGetParameterNames() const	AbstractUntemplatedParameterisedSystem
rGetParameterUnits() const	AbstractUntemplatedParameterisedSystem
rGetStateVariableNames() const	AbstractCardiacCell	[virtual]
rGetStateVariables()	AbstractParameterisedSystem< std::vector< double > >
rGetStateVariableUnits() const	AbstractUntemplatedParameterisedSystem
RToF	CorriasBuistICCModified	[private]
serialize(Archive &archive, const unsigned int version)	CorriasBuistICCModified	[inline, private]
SetAnyVariable(unsigned index, double value)	AbstractParameterisedSystem< std::vector< double > >
SetAnyVariable(const std::string &rName, double value)	AbstractParameterisedSystem< std::vector< double > >
SetCarbonMonoxideScaleFactor(double scaleFactor)	CorriasBuistICCModified
SetDefaultInitialCondition(unsigned index, double initialCondition)	AbstractParameterisedSystem< std::vector< double > >
SetDefaultInitialConditions(const std::vector< double > &rInitialConditions)	AbstractParameterisedSystem< std::vector< double > >
SetFixedVoltage(double voltage)	AbstractCardiacCellInterface
SetFractionOfVDDRInPU(double fraction)	CorriasBuistICCModified
SetIntracellularStimulusFunction(boost::shared_ptr< AbstractStimulusFunction > pStimulus)	AbstractCardiacCellInterface
SetIP3Concentration(double concentration)	CorriasBuistICCModified
SetParameter(const std::string &rParameterName, double value)	AbstractCardiacCell	[virtual]
SetParameter(unsigned parameterIndex, double value)	AbstractCardiacCell	[virtual]
SetSercaPumpScaleFactor(double scaleFactor)	CorriasBuistICCModified
SetSlowValues(const std::vector< double > &rSlowValues)	AbstractCardiacCell	[virtual]
SetState(CellModelState state)	AbstractCardiacCell	[virtual]
SetStateVariable(unsigned index, double newValue)	AbstractCardiacCell	[virtual]
SetStateVariable(const std::string &rName, double newValue)	AbstractCardiacCell	[virtual]
SetStateVariables(const std::vector< double > &rVariables)	AbstractCardiacCell	[virtual]
SetStimulusFunction(boost::shared_ptr< AbstractStimulusFunction > pStimulus)	AbstractCardiacCellInterface
SetStretch(double stretch)	AbstractCardiacCellInterface	[inline, virtual]
SetTimestep(double dt)	AbstractCardiacCell	[virtual]
SetUsedInTissueSimulation(bool tissue=true)	AbstractCardiacCellInterface
SetVoltage(double voltage)	AbstractCardiacCell	[virtual]
SetVoltageDerivativeToZero(bool clamp=true)	AbstractCardiacCellInterface	[virtual]
SolveAndUpdateState(double tStart, double tEnd)	AbstractCardiacCell	[virtual]
T	CorriasBuistICCModified	[private]
T_correction_BK	CorriasBuistICCModified	[private]
T_correction_Ca	CorriasBuistICCModified	[private]
T_correction_K	CorriasBuistICCModified	[private]
T_correction_Na	CorriasBuistICCModified	[private]
T_exp	CorriasBuistICCModified	[private]
tau_d_CaCl	CorriasBuistICCModified	[private]
tau_d_ERG	CorriasBuistICCModified	[private]
tau_d_kv11	CorriasBuistICCModified	[private]
tau_d_Ltype	CorriasBuistICCModified	[private]
tau_d_Na	CorriasBuistICCModified	[private]
tau_d_NSCC	CorriasBuistICCModified	[private]
tau_d_VDDR	CorriasBuistICCModified	[private]
tau_f_ca_Ltype	CorriasBuistICCModified	[private]
tau_f_kv11	CorriasBuistICCModified	[private]
tau_f_Ltype	CorriasBuistICCModified	[private]
tau_f_Na	CorriasBuistICCModified	[private]
tau_f_VDDR	CorriasBuistICCModified	[private]
tauh	CorriasBuistICCModified	[private]
UseCellMLDefaultStimulus()	AbstractCardiacCellInterface	[virtual]
V_cyto	CorriasBuistICCModified	[private]
V_ER	CorriasBuistICCModified	[private]
V_MITO	CorriasBuistICCModified	[private]
V_PU	CorriasBuistICCModified	[private]
VerifyStateVariables()	CorriasBuistICCModified	[virtual]
Vol	CorriasBuistICCModified	[private]
~AbstractCardiacCell()	AbstractCardiacCell	[virtual]
~AbstractCardiacCellInterface()	AbstractCardiacCellInterface	[virtual]
~AbstractOdeSystem()	AbstractOdeSystem	[virtual]
~AbstractUntemplatedParameterisedSystem()	AbstractUntemplatedParameterisedSystem	[virtual]
~CorriasBuistICCModified()	CorriasBuistICCModified