TysonNovakCellCycleModel Member List

This is the complete list of members for TysonNovakCellCycleModel, including all inherited members.

AbstractCellCycleModel()	AbstractCellCycleModel
AbstractOdeBasedCellCycleModel(double lastTime=SimulationTime::Instance()->GetTime(), boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())	AbstractOdeBasedCellCycleModel
AdjustOdeParameters(double currentTime)	CellCycleModelOdeHandler	[protected, virtual]
boost::serialization::access class	TysonNovakCellCycleModel	[friend]
CanCellTerminallyDifferentiate()	TysonNovakCellCycleModel	[virtual]
CellCycleModelOdeHandler(double lastTime=SimulationTime::Instance()->GetTime(), boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())	CellCycleModelOdeHandler
CreateCellCycleModel()	TysonNovakCellCycleModel	[virtual]
GetAge()	AbstractCellCycleModel
GetAverageStemCellCycleTime()	TysonNovakCellCycleModel	[virtual]
GetAverageTransitCellCycleTime()	TysonNovakCellCycleModel	[virtual]
GetBirthTime() const	AbstractCellCycleModel
GetCell()	AbstractCellCycleModel
GetCurrentCellCyclePhase()	AbstractCellCycleModel
GetDimension()	AbstractCellCycleModel
GetDt()	CellCycleModelOdeHandler
GetG1Duration()	AbstractCellCycleModel	[virtual]
GetG2Duration()	TysonNovakCellCycleModel	[virtual]
GetIdentifier() const	Identifiable
GetMDuration()	TysonNovakCellCycleModel	[virtual]
GetMinimumGapDuration()	AbstractCellCycleModel
GetOdeSolver() const	CellCycleModelOdeHandler
GetOdeStopTime()	AbstractOdeBasedCellCycleModel
GetOdeSystem() const	CellCycleModelOdeHandler
GetProteinConcentrations() const	AbstractOdeBasedCellCycleModel
GetSDuration()	TysonNovakCellCycleModel	[virtual]
GetSG2MDuration()	AbstractCellCycleModel
GetStemCellG1Duration()	AbstractCellCycleModel
GetTransitCellG1Duration()	AbstractCellCycleModel
Initialise()	TysonNovakCellCycleModel	[virtual]
InitialiseDaughterCell()	TysonNovakCellCycleModel	[virtual]
mBirthTime	AbstractCellCycleModel	[protected]
mCurrentCellCyclePhase	AbstractCellCycleModel	[protected]
mDimension	AbstractCellCycleModel	[protected]
mDivideTime	AbstractOdeBasedCellCycleModel	[protected]
mDt	CellCycleModelOdeHandler	[protected]
mFinishedRunningOdes	AbstractOdeBasedCellCycleModel	[protected]
mG1Duration	AbstractCellCycleModel	[protected]
mG2Duration	AbstractCellCycleModel	[protected]
mG2PhaseStartTime	AbstractOdeBasedCellCycleModel	[protected]
mLastTime	CellCycleModelOdeHandler	[protected]
mMDuration	AbstractCellCycleModel	[protected]
mMinimumGapDuration	AbstractCellCycleModel	[protected]
mpCell	AbstractCellCycleModel	[protected]
mpOdeSolver	CellCycleModelOdeHandler	[protected]
mpOdeSystem	CellCycleModelOdeHandler	[protected]
mReadyToDivide	AbstractCellCycleModel	[protected]
mSDuration	AbstractCellCycleModel	[protected]
mStemCellG1Duration	AbstractCellCycleModel	[protected]
mTransitCellG1Duration	AbstractCellCycleModel	[protected]
OutputCellCycleModelInfo(out_stream &rParamsFile)	AbstractCellCycleModel
OutputCellCycleModelParameters(out_stream &rParamsFile)	TysonNovakCellCycleModel	[virtual]
ReadyToDivide()	AbstractCellCycleModel	[virtual]
ResetForDivision()	TysonNovakCellCycleModel	[virtual]
serialize(Archive &archive, const unsigned int version)	TysonNovakCellCycleModel	[inline, private]
SetBirthTime(double birthTime)	AbstractOdeBasedCellCycleModel	[virtual]
SetCell(CellPtr pCell)	AbstractCellCycleModel
SetDimension(unsigned dimension)	AbstractCellCycleModel
SetDivideTime(double divideTime)	AbstractOdeBasedCellCycleModel
SetDt(double timeStep)	CellCycleModelOdeHandler
SetFinishedRunningOdes(bool finishedRunningOdes)	AbstractOdeBasedCellCycleModel
SetG2Duration(double g2Duration)	AbstractCellCycleModel
SetG2PhaseStartTime(double g2PhaseStartTime)	AbstractOdeBasedCellCycleModel
SetLastTime(double lastTime)	CellCycleModelOdeHandler
SetMDuration(double mDuration)	AbstractCellCycleModel
SetMinimumGapDuration(double minimumGapDuration)	AbstractCellCycleModel
SetOdeSystem(AbstractOdeSystem *pOdeSystem)	CellCycleModelOdeHandler
SetProteinConcentrationsForTestsOnly(double lastTime, std::vector< double > proteinConcentrations)	AbstractOdeBasedCellCycleModel
SetSDuration(double sDuration)	AbstractCellCycleModel
SetStateVariables(const std::vector< double > &rStateVariables)	CellCycleModelOdeHandler
SetStemCellG1Duration(double stemCellG1Duration)	AbstractCellCycleModel
SetTransitCellG1Duration(double transitCellG1Duration)	AbstractCellCycleModel
SolveOdeToTime(double currentTime)	CellCycleModelOdeHandler	[protected]
TestOdeBasedCellCycleModels (defined in TysonNovakCellCycleModel)	TysonNovakCellCycleModel	[friend]
TysonNovakCellCycleModel(boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())	TysonNovakCellCycleModel
UpdateCellCyclePhase()	AbstractOdeBasedCellCycleModel	[virtual]
~AbstractCellCycleModel()	AbstractCellCycleModel	[virtual]
~AbstractOdeBasedCellCycleModel()	AbstractOdeBasedCellCycleModel	[virtual]
~CellCycleModelOdeHandler()	CellCycleModelOdeHandler	[virtual]
~Identifiable()	Identifiable	[virtual]