CellBetaCateninWriter< ELEMENT_DIM, SPACE_DIM > Class Template Reference

#include <CellBetaCateninWriter.hpp>

Inherits AbstractCellWriter< ELEMENT_DIM, SPACE_DIM >.

Collaboration diagram for CellBetaCateninWriter< ELEMENT_DIM, SPACE_DIM >:

[legend]

List of all members.

Public Member Functions
	CellBetaCateninWriter ()
double	GetCellDataForVtkOutput (CellPtr pCell, AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > *pCellPopulation)
virtual void	VisitCell (CellPtr pCell, AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > *pCellPopulation)
Private Member Functions
template<class Archive >
void	serialize (Archive &archive, const unsigned int version)
Friends
class	boost::serialization::access

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Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class CellBetaCateninWriter< ELEMENT_DIM, SPACE_DIM >

A class written using the visitor pattern for writing cell beta catenin levels to file.

Definition at line 46 of file CellBetaCateninWriter.hpp.

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Constructor & Destructor Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

CellBetaCateninWriter< ELEMENT_DIM, SPACE_DIM >::CellBetaCateninWriter

(

)

[inline]

Default constructor.

Definition at line 40 of file CellBetaCateninWriter.cpp.

References AbstractCellWriter< ELEMENT_DIM, SPACE_DIM >::mVtkCellDataName.

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Member Function Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

double CellBetaCateninWriter< ELEMENT_DIM, SPACE_DIM >::GetCellDataForVtkOutput	(	CellPtr	pCell,
		AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > *	pCellPopulation
	)			[inline, virtual]

Overridden GetCellDataForVtkOutput() method.

Get a double associated with a cell. This method reduces duplication of code between the methods VisitCell() and AddVtkData().

Parameters:

	pCell	a cell
	pCellPopulation	a pointer to the cell population owning the cell

Returns:

data associated with the cell

Todo:

#2441 - implement this method

Implements AbstractCellWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 47 of file CellBetaCateninWriter.cpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

template<class Archive >

void CellBetaCateninWriter< ELEMENT_DIM, SPACE_DIM >::serialize	(	Archive &	archive,
		const unsigned int	version
	)			[inline, private]

Serialize the object and its member variables.

Parameters:

	archive	the archive
	version	the current version of this class

Reimplemented from AbstractCellWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 58 of file CellBetaCateninWriter.hpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void CellBetaCateninWriter< ELEMENT_DIM, SPACE_DIM >::VisitCell	(	CellPtr	pCell,
		AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > *	pCellPopulation
	)			[inline, virtual]

Overridden VisitCell() method. Visit a cell and write its data.

Parameters:

	pCell	the cell to write
	pCellPopulation	a pointer to the cell population owning the cell.

Implements AbstractCellWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 54 of file CellBetaCateninWriter.cpp.

References AbstractVanLeeuwen2009WntSwatCellCycleModel::GetCytoplasmicBetaCateninLevel(), AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::GetLocationIndexUsingCell(), AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::GetLocationOfCellCentre(), AbstractVanLeeuwen2009WntSwatCellCycleModel::GetMembraneBoundBetaCateninLevel(), AbstractVanLeeuwen2009WntSwatCellCycleModel::GetNuclearBetaCateninLevel(), and AbstractCellBasedWriter< ELEMENT_DIM, SPACE_DIM >::mpOutStream.

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Friends And Related Function Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

friend class boost::serialization::access [friend]

Needed for serialization.

Reimplemented from AbstractCellWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 50 of file CellBetaCateninWriter.hpp.

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The documentation for this class was generated from the following files:

• crypt/src/population/writers/CellBetaCateninWriter.hpp
• crypt/src/population/writers/CellBetaCateninWriter.cpp