SimpleUniformSourcePde< DIM > Class Template Reference

#include <SimpleUniformSourcePde.hpp>

Inherits AbstractLinearEllipticPde< DIM, DIM >.

Collaboration diagram for SimpleUniformSourcePde< DIM >:

[legend]

List of all members.

Public Member Functions
	SimpleUniformSourcePde (double coefficient=0.0)
double	GetCoefficient () const
double	ComputeConstantInUSourceTerm (const ChastePoint< DIM > &rX, Element< DIM, DIM > *pElement)
double	ComputeLinearInUCoeffInSourceTerm (const ChastePoint< DIM > &rX, Element< DIM, DIM > *pElement)
c_matrix< double, DIM, DIM >	ComputeDiffusionTerm (const ChastePoint< DIM > &rX)
Private Member Functions
template<class Archive >
void	serialize (Archive &archive, const unsigned int version)
Private Attributes
double	mCoefficient
Friends
class	TestCellBasedPdes
class	boost::serialization::access

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Detailed Description

template<unsigned DIM>
class SimpleUniformSourcePde< DIM >

A simple nutrient PDE which is not directly coupled to the cell population.

Definition at line 48 of file SimpleUniformSourcePde.hpp.

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Constructor & Destructor Documentation

template<unsigned DIM>

SimpleUniformSourcePde< DIM >::SimpleUniformSourcePde

(

double

coefficient = 0.0

)

[inline]

Constructor.

Parameters:

coefficient

the coefficient of consumption of nutrient by cells (defaults to 0.0)

Definition at line 39 of file SimpleUniformSourcePde.cpp.

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Member Function Documentation

template<unsigned DIM>

double SimpleUniformSourcePde< DIM >::ComputeConstantInUSourceTerm	(	const ChastePoint< DIM > &	rX,
		Element< DIM, DIM > *	pElement
	)			[inline]

Overridden ComputeConstantInUSourceTerm() method.

Parameters:

	rX	The point in space
	pElement	The element

Returns:

the constant in u part of the source term, i.e g(x) in Div(D Grad u) + f(x)u + g(x) = 0.

Definition at line 51 of file SimpleUniformSourcePde.cpp.

template<unsigned DIM>

c_matrix< double, DIM, DIM > SimpleUniformSourcePde< DIM >::ComputeDiffusionTerm

(

const ChastePoint< DIM > &

rX

)

[inline]

Overridden ComputeDiffusionTerm() method.

Parameters:

rX

The point in space at which the diffusion term is computed

Returns:

a matrix.

Definition at line 63 of file SimpleUniformSourcePde.cpp.

template<unsigned DIM>

double SimpleUniformSourcePde< DIM >::ComputeLinearInUCoeffInSourceTerm	(	const ChastePoint< DIM > &	rX,
		Element< DIM, DIM > *	pElement
	)			[inline]

Overridden ComputeLinearInUCoeffInSourceTerm() method.

Parameters:

	rX	The point in space
	pElement	the element

Returns:

the coefficient of u in the linear part of the source term, i.e f(x) in Div(D Grad u) + f(x)u + g(x) = 0.

Definition at line 57 of file SimpleUniformSourcePde.cpp.

References SimpleUniformSourcePde< DIM >::mCoefficient.

template<unsigned DIM>

double SimpleUniformSourcePde< DIM >::GetCoefficient

(

)

const [inline]

Returns:

mCoefficient

Definition at line 45 of file SimpleUniformSourcePde.cpp.

References SimpleUniformSourcePde< DIM >::mCoefficient.

template<unsigned DIM>

template<class Archive >

void SimpleUniformSourcePde< DIM >::serialize	(	Archive &	archive,
		const unsigned int	version
	)			[inline, private]

Serialize the PDE and its member variables.

Parameters:

	archive	the archive
	version	the current version of this class

Reimplemented from AbstractLinearEllipticPde< DIM, DIM >.

Definition at line 63 of file SimpleUniformSourcePde.hpp.

References SimpleUniformSourcePde< DIM >::mCoefficient.

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Friends And Related Function Documentation

template<unsigned DIM>

friend class boost::serialization::access [friend]

Needed for serialization.

Reimplemented from AbstractLinearEllipticPde< DIM, DIM >.

Definition at line 55 of file SimpleUniformSourcePde.hpp.

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Member Data Documentation

template<unsigned DIM>

double SimpleUniformSourcePde< DIM >::mCoefficient [private]

Coefficient of consumption of nutrient by cells.

Definition at line 70 of file SimpleUniformSourcePde.hpp.

Referenced by SimpleUniformSourcePde< DIM >::ComputeLinearInUCoeffInSourceTerm(), SimpleUniformSourcePde< DIM >::GetCoefficient(), and SimpleUniformSourcePde< DIM >::serialize().

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The documentation for this class was generated from the following files:

• cell_based/src/population/pdes/SimpleUniformSourcePde.hpp
• cell_based/src/population/pdes/SimpleUniformSourcePde.cpp