, including all inherited members.
| AbstractCellBasedSimulation(AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > &rCellPopulation, bool deleteCellPopulationInDestructor=false, bool initialiseCells=true) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| AddCellKiller(boost::shared_ptr< AbstractCellKiller< SPACE_DIM > > pCellKiller) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| AddCellPopulationBoundaryCondition(boost::shared_ptr< AbstractCellPopulationBoundaryCondition< ELEMENT_DIM, SPACE_DIM > > pBoundaryCondition) | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| AddForce(boost::shared_ptr< AbstractForce< ELEMENT_DIM, SPACE_DIM > > pForce) | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| AddSimulationModifier(boost::shared_ptr< AbstractCellBasedSimulationModifier< ELEMENT_DIM, SPACE_DIM > > pSimulationModifier) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| boost::serialization::access class | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [friend] |
| CalculateCellDivisionVector(CellPtr pParentCell) | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| DoCellBirth() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| DoCellRemoval() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, protected] |
| GetCellBasedPdeHandler() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetDt() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetIdentifier() const | Identifiable | |
| GetNodeLocation(const unsigned &rNodeIndex) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumBirths() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumDeaths() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetOutputCellVelocities() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetOutputDirectory() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetOutputDivisionLocations() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetSimulationModifiers() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetUpdateCellPopulationRule() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| mBoundaryConditions | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mCellKillers | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mDeleteCellPopulationInDestructor | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mDt | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mEndTime | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mForceCollection | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mInitialiseCells | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mNoBirth | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mNumBirths | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mNumDeaths | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mOutputCellVelocities | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mOutputDirectory | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mOutputDivisionLocations | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mpCellBasedPdeHandler | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mpCellVelocitiesFile | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mpDivisionLocationFile | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mpVizSetupFile | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mrCellPopulation | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mSamplingTimestepMultiple | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mSimulationModifiers | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mSimulationOutputDirectory | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mUpdateCellPopulation | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [protected] |
| OffLatticeSimulation(AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > &rCellPopulation, bool deleteCellPopulationInDestructor=false, bool initialiseCells=true) | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| OutputAdditionalSimulationSetup(out_stream &rParamsFile) | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| OutputSimulationParameters(out_stream &rParamsFile) | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| OutputSimulationSetup() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, protected] |
| RemoveAllCellKillers() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| RemoveAllCellPopulationBoundaryConditions() | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| RemoveAllForces() | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| rGetCellPopulation() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| rGetCellPopulation() const | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| serialize(Archive &archive, const unsigned int version) | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, private] |
| SetCellBasedPdeHandler(CellBasedPdeHandler< SPACE_DIM > *pCellBasedPdeHandler) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetDt(double dt) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetEndTime(double endTime) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetNoBirth(bool noBirth) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetOutputCellVelocities(bool outputCellVelocities) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetOutputDirectory(std::string outputDirectory) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetOutputDivisionLocations(bool outputDivisionLocations) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetSamplingTimestepMultiple(unsigned samplingTimestepMultiple) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetUpdateCellPopulationRule(bool updateCellPopulation) | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetupSolve() | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| Solve() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline] |
| StoppingEventHasOccurred() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| TestOffLatticeSimulationWithNodeBasedCellPopulation (defined in OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM >) | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [friend] |
| UpdateCellLocationsAndTopology() | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| UpdateCellPopulation() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| UpdateNodePositions() | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| WriteVisualizerSetupFile() | OffLatticeSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| ~AbstractCellBasedSimulation() | AbstractCellBasedSimulation< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| ~Identifiable() | Identifiable | [virtual] |
